Three-dimensional Solute Transport Modeling in Coupled Soil and Plant Root Systems PDF Download

Author: Natalie Schröder
Publisher: Forschungszentrum Jülich
ISBN: 3893369236
Category :
Languages : en
Pages : 151

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Author: Tom Schröder
Publisher: Forschungszentrum Jülich
ISBN: 3893365761
Category :
Languages : en
Pages : 89

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Author: Christina Korntreff
Publisher: Forschungszentrum Jülich
ISBN: 3893369791
Category :
Languages : en
Pages : 117

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Author: Sonja Holl
Publisher: Forschungszentrum Jülich
ISBN: 389336949X
Category :
Languages : en
Pages : 207

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Book Description
Scientific workflows have emerged as a key technology that assists scientists with the design, management, execution, sharing and reuse of in silico experiments. Workflow management systems simplify the management of scientific workflows by providing graphical interfaces for their development, monitoring and analysis. Nowadays, e-Science combines such workflow management systems with large-scale data and computing resources into complex research infrastructures. For instance, e-Science allows the conveyance of best practice research in collaborations by providing workflow repositories, which facilitate the sharing and reuse of scientific workflows. However, scientists are still faced with different limitations while reusing workflows. One of the most common challenges they meet is the need to select appropriate applications and their individual execution parameters. If scientists do not want to rely on default or experience-based parameters, the best-effort option is to test different workflow set-ups using either trial and error approaches or parameter sweeps. Both methods may be inefficient or time consuming respectively, especially when tuning a large number of parameters. Therefore, scientists require an effective and efficient mechanism that automatically tests different workflow set-ups in an intelligent way and will help them to improve their scientific results. This thesis addresses the limitation described above by defining and implementing an approach for the optimization of scientific workflows. In the course of this work, scientists’ needs are investigated and requirements are formulated resulting in an appropriate optimization concept. In a following step, this concept is prototypically implemented by extending a workflow management system with an optimization framework, including general mechanisms required to conduct workflow optimization. As optimization is an ongoing research topic, different algorithms are provided by pluggable extensions (plugins) that can be loosely coupled with the framework, resulting in a generic and quickly extendable system. In this thesis, an exemplary plugin is introduced which applies a Genetic Algorithm for parameter optimization. In order to accelerate and therefore make workflow optimization feasible at all, e-Science infrastructures are utilized for the parallel execution of scientific workflows. This is empowered by additional extensions enabling the execution of applications and workflows on distributed computing resources. The actual implementation and therewith the general approach of workflow optimization is experimentally verified by four use cases in the life science domain. All workflows were significantly improved, which demonstrates the advantage of the proposed workflow optimization. Finally, a new collaboration-based approach is introduced that harnesses optimization provenance to make optimization faster and more robust in the future.

Author: Pierre Dutilleul
Publisher: Frontiers Media SA
ISBN: 2889197913
Category :
Languages : en
Pages : 93

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Until recently, a majority of the applications of X-ray computed tomography (CT) scanning in plant sciences remained descriptive; some included a quantification of the plant materials when the root-soil isolation or branch-leaf separation was satisfactory; and a few involved the modeling of plant biology processes or the assessment of treatment or disease effects on plant biomass and structures during growth. In the last decade, repeated CT scanning of the same plants was reported in an increasing number of studies in which moderate doses of X-rays had been used. Besides the general objectives of Frontiers in Plant Science research topics, “Branching and Rooting Out with a CT Scanner” was proposed to meet specific objectives: (i) providing a non-technical update on knowledge about the application of CT scanning technology to plants, starting with the type of CT scanning data collected (CT images vs. CT numbers) and their processing in the graphical and numerical approaches; (ii) drawing the limits of the CT scanning approach, which because it is based on material density can distinguish materials with contrasting or moderately overlapping densities (e.g., branches vs. leaves, roots vs. non-organic soils) but not the others (e.g., roots vs. organic soils); (iii) explaining with a sufficient level of detail the main procedures used for graphical, quantitative and statistical analyses of plant CT scanning data, including fractal complexity measures and statistics appropriate for repeated plant CT scanning, in experiments where the research hypotheses are about biological processes such as light interception by canopies, root disease development and plant growth under stress conditions; (iv) comparing plant CT scanning with an alternative technology that applies to plants, such as the phenomics platforms which target leaf canopies; and (v) providing current and potential users of plant CT scanning with up-to-date information and exhaustive documentation, including clear perspectives and well-defined goals for the future, for them to be even more efficient or most efficient from start in their research work.

Author: Dennis J. Timlin
Publisher: John Wiley & Sons
ISBN: 0891183388
Category : Technology & Engineering
Languages : en
Pages : 336

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Book Description
Research progress in soil–root growth interactions has been slow due to the relative inaccessibility of roots in their natural environment and because root research cuts across the boundaries of soil science, ecology, crop science, and plant physiology, among others. Enhancing Understanding and Quantification of Soil–Root Growth Interactions takes on this challenge to solve society's growing problems in the conservation of quality water and soil resources. Researchers must come together and leverage our understanding of the rhizosphere to maximize efficient, sustainable use of limited water and soil nutrient resources. This is a serious calling—from addressing the critical needs in nations who cannot afford costly fertilizers, to the global challenge of enhancing soil carbon storage to reduce climate change effects of elevated carbon dioxide. This book brings together scientists from different disciplines, worldwide, together to encourage synthesis of transdisciplinary knowledge and further research and developments in the area of root–soil interactions.

Author: Jan Gliński
Publisher: Springer Science & Business Media
ISBN: 9048135842
Category : Technology & Engineering
Languages : en
Pages : 1075

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Book Description
This Encyclopedia of Agrophysics will provide up-to-date information on the physical properties and processes affecting the quality of the environment and plant production. It will be a "first-up" volume which will nicely complement the recently published Encyclopedia of Soil Science, (November 2007) which was published in the same series. In a single authoritative volume a collection of about 250 informative articles and ca 400 glossary terms covering all aspects of agrophysics will be presented. The authors will be renowned specialists in various aspects in agrophysics from a wide variety of countries. Agrophysics is important both for research and practical use not only in agriculture, but also in areas like environmental science, land reclamation, food processing etc. Agrophysics is a relatively new interdisciplinary field closely related to Agrochemistry, Agrobiology, Agroclimatology and Agroecology. Nowadays it has been fully accepted as an agricultural and environmental discipline. As such this Encyclopedia volume will be an indispensable working tool for scientists and practitioners from different disciplines, like agriculture, soil science, geosciences, environmental science, geography, and engineering.

Author: OECD
Publisher: OECD Publishing
ISBN: 9264099727
Category :
Languages : en
Pages : 540

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Proceedings of a conference on innovative systems for preserving the quality of soil used in agriculture.

Author:
Publisher: Elsevier
ISBN: 0080490174
Category : Technology & Engineering
Languages : en
Pages : 451

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Book Description
This volume in Advances in Agronomy contains seven outstanding reviews that discuss cutting edge developments in the crop and soil sciences. Chapter 1 addresses desertification and its relation to climate change. Chapter 2 discusses fate and transport of viruses in porous media. Chapter 3 is a comprehensive treatment of the future needs of root water and nutrient uptake modeling. Chapter 4 is a review on micronutrients in crop production, including a discussion on improving the supply and acquisition. Chapter 5 provides information on soils in tropical and temperate regions. Chapter 6 desribes free-air CO2 enrichment in agriculture. Lastly, chapter 7 discusses break crops and their application in organic agriculture.Advances in Agronomy continues to be recognized as a leading reference and a first-rate source of the latest and best research in agronomy. Major reviews deal with cutting edge issues of interest to agronomists, as well as crop and soil scientists. As always, the topics covered are varied and exemplary of the panoply of subject matter dealt with by this long-running serial. Donald Sparks is the editor and has been a president of the Soil Science Society of America.Advances in Agronomy has the highest impact factor among serial publications in Agriculture. The Science Citation Index, 1986, reports an impact factor over 2,459 and a cited half-life over 10 years.

Author: Peter J. Gregory
Publisher: John Wiley & Sons
ISBN: 1405173084
Category : Technology & Engineering
Languages : en
Pages : 328

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Book Description
The root system is a vital part of the plant and therefore understanding roots and their functioning is key to agricultural, plant and soil scientists. In Plant Roots Professor Peter Gregory brings together recent developments in techniques and an improved understanding of plant and soil interactions to present a comprehensive look at this important relationship, covering: Root response to, and modification of, soils Genetic control of roots’ responses to the environment Use of modern techniques in imaging, molecular biology and analytical chemistry Practical exploitation of root characters This book will be a vital tool for plant, crop, soil and agricultural scientists, plant physiologists, environmental scientists, ecologists and hydrologists. It will be a valuable addition to libraries in universities, agricultural colleges and research establishments where these subjects are studied and taught.