Multivariate Statistical Machine Learning Methods for Genomic Prediction PDF Download

Author: Osval Antonio Montesinos López
Publisher: Springer Nature
ISBN: 3030890104
Category : Technology & Engineering
Languages : en
Pages : 707

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Book Description
This book is open access under a CC BY 4.0 license This open access book brings together the latest genome base prediction models currently being used by statisticians, breeders and data scientists. It provides an accessible way to understand the theory behind each statistical learning tool, the required pre-processing, the basics of model building, how to train statistical learning methods, the basic R scripts needed to implement each statistical learning tool, and the output of each tool. To do so, for each tool the book provides background theory, some elements of the R statistical software for its implementation, the conceptual underpinnings, and at least two illustrative examples with data from real-world genomic selection experiments. Lastly, worked-out examples help readers check their own comprehension.The book will greatly appeal to readers in plant (and animal) breeding, geneticists and statisticians, as it provides in a very accessible way the necessary theory, the appropriate R code, and illustrative examples for a complete understanding of each statistical learning tool. In addition, it weighs the advantages and disadvantages of each tool.

Author: Alan J. Izenman
Publisher: Springer Science & Business Media
ISBN: 0387781897
Category : Mathematics
Languages : en
Pages : 757

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Book Description
This is the first book on multivariate analysis to look at large data sets which describes the state of the art in analyzing such data. Material such as database management systems is included that has never appeared in statistics books before.

Author: Trevor Hastie
Publisher: Springer Science & Business Media
ISBN: 0387216065
Category : Mathematics
Languages : en
Pages : 545

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Book Description
During the past decade there has been an explosion in computation and information technology. With it have come vast amounts of data in a variety of fields such as medicine, biology, finance, and marketing. The challenge of understanding these data has led to the development of new tools in the field of statistics, and spawned new areas such as data mining, machine learning, and bioinformatics. Many of these tools have common underpinnings but are often expressed with different terminology. This book describes the important ideas in these areas in a common conceptual framework. While the approach is statistical, the emphasis is on concepts rather than mathematics. Many examples are given, with a liberal use of color graphics. It should be a valuable resource for statisticians and anyone interested in data mining in science or industry. The book’s coverage is broad, from supervised learning (prediction) to unsupervised learning. The many topics include neural networks, support vector machines, classification trees and boosting---the first comprehensive treatment of this topic in any book. This major new edition features many topics not covered in the original, including graphical models, random forests, ensemble methods, least angle regression & path algorithms for the lasso, non-negative matrix factorization, and spectral clustering. There is also a chapter on methods for “wide” data (p bigger than n), including multiple testing and false discovery rates. Trevor Hastie, Robert Tibshirani, and Jerome Friedman are professors of statistics at Stanford University. They are prominent researchers in this area: Hastie and Tibshirani developed generalized additive models and wrote a popular book of that title. Hastie co-developed much of the statistical modeling software and environment in R/S-PLUS and invented principal curves and surfaces. Tibshirani proposed the lasso and is co-author of the very successful An Introduction to the Bootstrap. Friedman is the co-inventor of many data-mining tools including CART, MARS, projection pursuit and gradient boosting.

Author: Vikas Khullar
Publisher: CRC Press
ISBN: 1003825591
Category : Computers
Languages : en
Pages : 294

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Book Description
The artificial intelligence-based framework, algorithms, and applications presented in this book take the perspective of Society 5.0 – a social order supported by innovation in data, information, and knowledge. It showcases current case studies of Society 5.0 in diverse areas such as healthcare, smart cities, and infrastructure. Key Features: Elaborates on the use of big data, cyber-physical systems, robotics, augmented-virtual reality, and cybersecurity as pillars for Society 5.0. Showcases the use of artificial intelligence, architecture, frameworks, and distributed and federated learning structures in Society 5.0. Discusses speech recognition, image classification, robotic process automation, natural language generation, and decision support automation. Elucidates the application of machine learning, deep learning, fuzzy-based systems, and natural language processing. Includes case studies on the application of Society 5.0 aspects in educational, medical, infrastructure, and smart cities. The book is intendended especially for graduate and postgraduate students, and academic researchers in the fields of computer science and engineering, electrical engineering, and information technology.

Author: Vijay Rani Rajpal
Publisher: Frontiers Media SA
ISBN: 2832528112
Category : Science
Languages : en
Pages : 312

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Book Description

Author: Momiao Xiong
Publisher: CRC Press
ISBN: 1315353415
Category : Mathematics
Languages : en
Pages : 595

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Book Description
Big Data in Omics and Imaging: Association Analysis addresses the recent development of association analysis and machine learning for both population and family genomic data in sequencing era. It is unique in that it presents both hypothesis testing and a data mining approach to holistically dissecting the genetic structure of complex traits and to designing efficient strategies for precision medicine. The general frameworks for association analysis and machine learning, developed in the text, can be applied to genomic, epigenomic and imaging data. FEATURES Bridges the gap between the traditional statistical methods and computational tools for small genetic and epigenetic data analysis and the modern advanced statistical methods for big data Provides tools for high dimensional data reduction Discusses searching algorithms for model and variable selection including randomization algorithms, Proximal methods and matrix subset selection Provides real-world examples and case studies Will have an accompanying website with R code The book is designed for graduate students and researchers in genomics, bioinformatics, and data science. It represents the paradigm shift of genetic studies of complex diseases– from shallow to deep genomic analysis, from low-dimensional to high dimensional, multivariate to functional data analysis with next-generation sequencing (NGS) data, and from homogeneous populations to heterogeneous population and pedigree data analysis. Topics covered are: advanced matrix theory, convex optimization algorithms, generalized low rank models, functional data analysis techniques, deep learning principle and machine learning methods for modern association, interaction, pathway and network analysis of rare and common variants, biomarker identification, disease risk and drug response prediction.

Author: Srivastava, Pramod Kumar
Publisher: IGI Global
ISBN:
Category : Computers
Languages : en
Pages : 315

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Book Description
Technology is constantly evolving, and machine learning is positioned to become a pivotal tool with the power to transform industries and revolutionize everyday life. This book underscores the urgency of leveraging the latest machine learning methodologies and theoretical advancements, all while harnessing a wealth of realistic data and affordable computational resources. Machine learning is no longer confined to theoretical domains; it is now a vital component in healthcare, manufacturing, education, finance, law enforcement, and marketing, ushering in an era of data-driven decision-making. Academic scholars seeking to unlock the potential of machine learning in the context of Industry 5.0 and advanced IoT applications will find that the groundbreaking book, Methodologies, Frameworks, and Applications of Machine Learning, introduces an unmissable opportunity to delve into the forefront of modern research and application. This book offers a wealth of knowledge and practical insights across a wide array of topics, ranging from conceptual frameworks and methodological approaches to the application of probability theory, statistical techniques, and machine learning in domains as diverse as e-government, healthcare, cyber-physical systems, and sustainable development, this comprehensive guide equips you with the tools to navigate the complexities of Industry 5.0 and the Internet of Things (IoT).

Author: Galety, Mohammad Gouse
Publisher: IGI Global
ISBN:
Category : Technology & Engineering
Languages : en
Pages : 359

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Book Description
In geospatial analysis, navigating the complexities of data interpretation and analysis presents a formidable challenge. Traditional methods often need to efficiently handle vast volumes of geospatial data while providing insightful and actionable results. Scholars and practitioners grapple with manual or rule-based approaches, hindering progress in understanding and addressing pressing issues such as climate change, urbanization, and resource management. Ethics, Machine Learning, and Python in Geospatial Analysis offers a solution to the challenges faced by leveraging the extensive library support and user-friendly interface of Python and machine learning. The book’s meticulously crafted chapters guide readers through the intricacies of Python programming and its application in geospatial analysis, from fundamental concepts to advanced techniques.

Author: Masashi Sugiyama
Publisher: Morgan Kaufmann
ISBN: 0128023503
Category : Mathematics
Languages : en
Pages : 535

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Book Description
Machine learning allows computers to learn and discern patterns without actually being programmed. When Statistical techniques and machine learning are combined together they are a powerful tool for analysing various kinds of data in many computer science/engineering areas including, image processing, speech processing, natural language processing, robot control, as well as in fundamental sciences such as biology, medicine, astronomy, physics, and materials. Introduction to Statistical Machine Learning provides a general introduction to machine learning that covers a wide range of topics concisely and will help you bridge the gap between theory and practice. Part I discusses the fundamental concepts of statistics and probability that are used in describing machine learning algorithms. Part II and Part III explain the two major approaches of machine learning techniques; generative methods and discriminative methods. While Part III provides an in-depth look at advanced topics that play essential roles in making machine learning algorithms more useful in practice. The accompanying MATLAB/Octave programs provide you with the necessary practical skills needed to accomplish a wide range of data analysis tasks. - Provides the necessary background material to understand machine learning such as statistics, probability, linear algebra, and calculus - Complete coverage of the generative approach to statistical pattern recognition and the discriminative approach to statistical machine learning - Includes MATLAB/Octave programs so that readers can test the algorithms numerically and acquire both mathematical and practical skills in a wide range of data analysis tasks - Discusses a wide range of applications in machine learning and statistics and provides examples drawn from image processing, speech processing, natural language processing, robot control, as well as biology, medicine, astronomy, physics, and materials

Author: Ugur Tamer
Publisher: CRC Press
ISBN: 1040147828
Category : Technology & Engineering
Languages : en
Pages : 252

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Book Description
Raman spectroscopy has become one of the most important techniques effectively applied to detect specific analytes and microorganisms in food samples. Raman Spectroscopy in the Food Industry provides a comprehensive overview of the current state of the art and future prospects of Raman spectroscopy in food analyses. Through in-depth chapters, the authors discuss the fundamental principles of Raman spectroscopy, its instrumentation, methodologies, and its diverse applications across various food matrices. Real-world case studies and practical examples underscore the transformative potential of Raman spectroscopy in reshaping our understanding, analysis, and innovation within the realm of food science. Featured topics included are as follows: Raman spectroscopy applications in food science and technology The unique property of Raman phenomena, along with the variations in signal modes The different food safety topics, such as toxins, biosafety, foodborne bacteria, and fermentation Machine-learning studies on Raman spectrosopy in food science As the editors, we are committed to providing a valuable resource that inspires further exploration and collaboration in harnessing the power of Raman spectroscopy for the advancement of food analyses. We sincerely hope that this book serves as a catalyst for pushing the boundaries of knowledge and driving innovation in this exciting field.