Monte Carlo Simulations of the Thermodynamics of Folding and Denaturation Transitions for Simple Model Proteins PDF Download

Author: Eamonn M. O'Toole
Publisher:
ISBN:
Category :
Languages : en
Pages : 570

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Author: R. A. Broglia
Publisher: IOS Press
ISBN: 9781586031664
Category : Science
Languages : en
Pages : 378

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Book Description
This text presents the results of broad interdisciplinary effort to study proteins in physical and evolutionary prospectives. Among the authors are physicists, chemists, crystallographers, and evolutionary biologists. Experimental and theoretical developments from molecules to cells are presented providing a broad picture of modern biophysical chemistry.

Author:
Publisher:
ISBN:
Category : Dissertations, Academic
Languages : en
Pages : 854

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Author: Valerie Daggett
Publisher: Elsevier
ISBN: 0080493785
Category : Medical
Languages : en
Pages : 477

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Book Description
Protein Simulation focuses on predicting how protein will act in vivo. These studies use computer analysis, computer modeling, and statistical probability to predict protein function.* Force Fields* Ligand Binding* Protein Membrane Simulation* Enzyme Dynamics* Protein Folding and unfolding simulations

Author: Ivet Bahar
Publisher: Garland Science
ISBN: 1351815016
Category : Science
Languages : en
Pages : 337

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Book Description
Protein Actions: Principles and Modeling is aimed at graduates, advanced undergraduates, and any professional who seeks an introduction to the biological, chemical, and physical properties of proteins. Broadly accessible to biophysicists and biochemists, it will be particularly useful to student and professional structural biologists and molecular biophysicists, bioinformaticians and computational biologists, biological chemists (particularly drug designers) and molecular bioengineers. The book begins by introducing the basic principles of protein structure and function. Some readers will be familiar with aspects of this, but the authors build up a more quantitative approach than their competitors. Emphasizing concepts and theory rather than experimental techniques, the book shows how proteins can be analyzed using the disciplines of elementary statistical mechanics, energetics, and kinetics. These chapters illuminate how proteins attain biologically active states and the properties of those states. The book ends with a synopsis the roles of computational biology and bioinformatics in protein science.

Author: Miwako Nakahara
Publisher:
ISBN:
Category :
Languages : en
Pages : 180

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Author: Tetsuji Tokihiro
Publisher: Springer Nature
ISBN: 981167132X
Category : Science
Languages : en
Pages : 179

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Book Description
This book describes the dynamics of biological cells and their mathematical modeling. The topics cover the dynamics of RNA polymerases in transcription, construction of vascular networks in angiogenesis, and synchronization of cardiomyocytes. Statistical analysis of single cell dynamics and classification of proteins by mathematical modeling are also presented. The book provides the most up-to-date information on both experimental results and mathematical models that can be used to analyze cellular dynamics. Novel experimental results and approaches to understand them will be appealing to the readers. Each chapter contains 1) an introductory description of the phenomenon, 2) explanations about the mathematical technique to analyze it, 3) new experimental results, 4) mathematical modeling and its application to the phenomenon. Elementary introductions for the biological phenomenon and mathematical approach to them are especially useful for beginners. The importance of collaboration between mathematics and biological sciences has been increasing and providing new outcomes. This book gives good examples of the fruitful collaboration between mathematics and biological sciences.

Author: Tao Jiang
Publisher: MIT Press
ISBN: 9780262100922
Category : Computers
Languages : en
Pages : 570

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Book Description
A survey of current topics in computational molecular biology. Computational molecular biology, or bioinformatics, draws on the disciplines of biology, mathematics, statistics, physics, chemistry, computer science, and engineering. It provides the computational support for functional genomics, which links the behavior of cells, organisms, and populations to the information encoded in the genomes, as well as for structural genomics. At the heart of all large-scale and high-throughput biotechnologies, it has a growing impact on health and medicine. This survey of computational molecular biology covers traditional topics such as protein structure modeling and sequence alignment, and more recent ones such as expression data analysis and comparative genomics. It combines algorithmic, statistical, database, and AI-based methods for studying biological problems. The book also contains an introductory chapter, as well as one on general statistical modeling and computational techniques in molecular biology. Each chapter presents a self-contained review of a specific subject. Not for sale in China, including Hong Kong.

Author: Muhammad H. Zaman
Publisher: Cambridge University Press
ISBN: 1139478966
Category : Science
Languages : en
Pages : 218

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Book Description
Cells are complex objects, representing a multitude of structures and processes. In order to understand the organization, interaction and hierarchy of these structures and processes, a quantitative understanding is absolutely critical. Traditionally, statistical mechanics-based treatment of biological systems has focused on the molecular level, with larger systems being ignored. This book integrates understanding from the molecular to the cellular and multi-cellular level in a quantitative framework that will benefit a wide audience engaged in biological, biochemical, biophysical and clinical research. It will build new bridges of quantitative understanding that link fundamental physical principles governing cellular structure and function with implications in clinical and biomedical contexts.

Author: Hagai Meirovitch
Publisher: CRC Press
ISBN: 1000072320
Category : Computers
Languages : en
Pages : 348

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Book Description
Nuclear Structure Physics connects to some of our fundamental questions about the creation of the universe and its basic constituents. At the same time, precise knowledge on the subject has led to the development of many important tools for humankind such as proton therapy and radioactive dating, among others. This book has chapters on some of the crucial and trending research topics in nuclear structure, including the nuclei lying on the extremes of spin, isospin and mass. A better theoretical understanding of these topics is important beyond the confines of the nuclear structure community. Additionally, the book will showcase the applicability and success of the different nuclear effective interaction parameters near the drip line, where hints for level reordering have already been seen, and where one can test the isospin-dependence of the interaction. The book offers comprehensive coverage of the most essential topics, including: • Nuclear Structure of Nuclei at or Near Drip-Lines • Synthesis challenges and properties of Superheavy nuclei • Nuclear Structure and Nuclear models - Ab-initio calculations, cluster models, Shell-model/DSM, RMF, Skyrme • Shell Closure, Magicity and other novel features of nuclei at extremes • Structure of Toroidal, Bubble Nuclei, halo and other exotic nuclei These topics are not only very interesting from a theoretical nuclear physics perspective but are also quite complimentary for ongoing nuclear physics experimental programs worldwide. The book chapters, written by experienced and well-known researchers/experts, will be helpful for master students, graduate students and researchers and serve as a standard and up-to-date research reference book on the topics covered.