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Cause and Correlation in Biology

Cause and Correlation in Biology PDF Author: Bill Shipley
Publisher: Cambridge University Press
ISBN: 9780521529211
Category : Mathematics
Languages : en
Pages : 330

Book Description
This book goes beyond the truism that 'correlation does not imply causation' and explores the logical and methodological relationships between correlation and causation. It presents a series of statistical methods that can test, and potentially discover, cause-effect relationships between variables in situations in which it is not possible to conduct randomised or experimentally controlled experiments. Many of these methods are quite new and most are generally unknown to biologists. In addition to describing how to conduct these statistical tests, the book also puts the methods into historical context and explains when they can and cannot justifiably be used to test or discover causal claims. Written in a conversational style that minimises technical jargon, the book is aimed at practising biologists and advanced students, and assumes only a very basic knowledge of introductory statistics.

Cause and Correlation in Biology

Cause and Correlation in Biology PDF Author: Bill Shipley
Publisher: Cambridge University Press
ISBN: 9780521529211
Category : Mathematics
Languages : en
Pages : 330

Book Description
This book goes beyond the truism that 'correlation does not imply causation' and explores the logical and methodological relationships between correlation and causation. It presents a series of statistical methods that can test, and potentially discover, cause-effect relationships between variables in situations in which it is not possible to conduct randomised or experimentally controlled experiments. Many of these methods are quite new and most are generally unknown to biologists. In addition to describing how to conduct these statistical tests, the book also puts the methods into historical context and explains when they can and cannot justifiably be used to test or discover causal claims. Written in a conversational style that minimises technical jargon, the book is aimed at practising biologists and advanced students, and assumes only a very basic knowledge of introductory statistics.

Cause and Correlation in Biology

Cause and Correlation in Biology PDF Author: Bill Shipley
Publisher: Cambridge University Press
ISBN: 1316539164
Category : Science
Languages : en
Pages : 493

Book Description
Many problems in biology require an understanding of the relationships among variables in a multivariate causal context. Exploring such cause-effect relationships through a series of statistical methods, this book explains how to test causal hypotheses when randomised experiments cannot be performed. This completely revised and updated edition features detailed explanations for carrying out statistical methods using the popular and freely available R statistical language. Sections on d-sep tests, latent constructs that are common in biology, missing values, phylogenetic constraints, and multilevel models are also an important feature of this new edition. Written for biologists and using a minimum of statistical jargon, the concept of testing multivariate causal hypotheses using structural equations and path analysis is demystified. Assuming only a basic understanding of statistical analysis, this new edition is a valuable resource for both students and practising biologists.

The Book of Why

The Book of Why PDF Author: Judea Pearl
Publisher: Basic Books
ISBN: 0465097618
Category : Computers
Languages : en
Pages : 432

Book Description
A Turing Award-winning computer scientist and statistician shows how understanding causality has revolutionized science and will revolutionize artificial intelligence "Correlation is not causation." This mantra, chanted by scientists for more than a century, has led to a virtual prohibition on causal talk. Today, that taboo is dead. The causal revolution, instigated by Judea Pearl and his colleagues, has cut through a century of confusion and established causality -- the study of cause and effect -- on a firm scientific basis. His work explains how we can know easy things, like whether it was rain or a sprinkler that made a sidewalk wet; and how to answer hard questions, like whether a drug cured an illness. Pearl's work enables us to know not just whether one thing causes another: it lets us explore the world that is and the worlds that could have been. It shows us the essence of human thought and key to artificial intelligence. Anyone who wants to understand either needs The Book of Why.

Causality

Causality PDF Author: Judea Pearl
Publisher: Cambridge University Press
ISBN: 052189560X
Category : Computers
Languages : en
Pages : 487

Book Description
Causality offers the first comprehensive coverage of causal analysis in many sciences, including recent advances using graphical methods. Pearl presents a unified account of the probabilistic, manipulative, counterfactual and structural approaches to causation, and devises simple mathematical tools for analyzing the relationships between causal connections, statistical associations, actions and observations. The book will open the way for including causal analysis in the standard curriculum of statistics, artificial intelligence ...

Calling Bullshit

Calling Bullshit PDF Author: Carl T. Bergstrom
Publisher: Random House Trade Paperbacks
ISBN: 0525509208
Category : Political Science
Languages : en
Pages : 338

Book Description
Bullshit isn’t what it used to be. Now, two science professors give us the tools to dismantle misinformation and think clearly in a world of fake news and bad data. “A modern classic . . . a straight-talking survival guide to the mean streets of a dying democracy and a global pandemic.”—Wired Misinformation, disinformation, and fake news abound and it’s increasingly difficult to know what’s true. Our media environment has become hyperpartisan. Science is conducted by press release. Startup culture elevates bullshit to high art. We are fairly well equipped to spot the sort of old-school bullshit that is based in fancy rhetoric and weasel words, but most of us don’t feel qualified to challenge the avalanche of new-school bullshit presented in the language of math, science, or statistics. In Calling Bullshit, Professors Carl Bergstrom and Jevin West give us a set of powerful tools to cut through the most intimidating data. You don’t need a lot of technical expertise to call out problems with data. Are the numbers or results too good or too dramatic to be true? Is the claim comparing like with like? Is it confirming your personal bias? Drawing on a deep well of expertise in statistics and computational biology, Bergstrom and West exuberantly unpack examples of selection bias and muddled data visualization, distinguish between correlation and causation, and examine the susceptibility of science to modern bullshit. We have always needed people who call bullshit when necessary, whether within a circle of friends, a community of scholars, or the citizenry of a nation. Now that bullshit has evolved, we need to relearn the art of skepticism.

Mechanism and Causality in Biology and Economics

Mechanism and Causality in Biology and Economics PDF Author: Hsiang-Ke Chao
Publisher: Springer Science & Business Media
ISBN: 9400724543
Category : Philosophy
Languages : en
Pages : 256

Book Description
This volume addresses fundamental issues in the philosophy of science in the context of two most intriguing fields: biology and economics. Written by authorities and experts in the philosophy of biology and economics, Mechanism and Causality in Biology and Economics provides a structured study of the concepts of mechanism and causality in these disciplines and draws careful juxtapositions between philosophical apparatus and scientific practice. By exploring the issues that are most salient to the contemporary philosophies of biology and economics and by presenting comparative analyses, the book serves as a platform not only for gaining mutual understanding between scientists and philosophers of the life sciences and those of the social sciences, but also for sharing interdisciplinary research that combines both philosophical concepts in both fields. The book begins by defining the concepts of mechanism and causality in biology and economics, respectively. The second and third parts investigate philosophical perspectives of various causal and mechanistic issues in scientific practice in the two fields. These two sections include chapters on causal issues in the theory of evolution; experiments and scientific discovery; representation of causal relations and mechanism by models in economics. The concluding section presents interdisciplinary studies of various topics concerning extrapolation of life sciences and social sciences, including chapters on the philosophical investigation of conjoining biological and economic analyses with, respectively, demography, medicine and sociology.

Concepts of Epidemiology

Concepts of Epidemiology PDF Author: Raj S. Bhopal
Publisher: Oxford University Press
ISBN: 0198739680
Category : Medical
Languages : en
Pages : 481

Book Description
First edition published in 2002. Second edition published in 2008.

Causality, Correlation And Artificial Intelligence For Rational Decision Making

Causality, Correlation And Artificial Intelligence For Rational Decision Making PDF Author: Tshilidzi Marwala
Publisher: World Scientific
ISBN: 9814630888
Category : Computers
Languages : en
Pages : 207

Book Description
Causality has been a subject of study for a long time. Often causality is confused with correlation. Human intuition has evolved such that it has learned to identify causality through correlation. In this book, four main themes are considered and these are causality, correlation, artificial intelligence and decision making. A correlation machine is defined and built using multi-layer perceptron network, principal component analysis, Gaussian Mixture models, genetic algorithms, expectation maximization technique, simulated annealing and particle swarm optimization. Furthermore, a causal machine is defined and built using multi-layer perceptron, radial basis function, Bayesian statistics and Hybrid Monte Carlo methods. Both these machines are used to build a Granger non-linear causality model. In addition, the Neyman-Rubin, Pearl and Granger causal models are studied and are unified. The automatic relevance determination is also applied to extend Granger causality framework to the non-linear domain. The concept of rational decision making is studied, and the theory of flexibly-bounded rationality is used to extend the theory of bounded rationality within the principle of the indivisibility of rationality. The theory of the marginalization of irrationality for decision making is also introduced to deal with satisficing within irrational conditions. The methods proposed are applied in biomedical engineering, condition monitoring and for modelling interstate conflict.

Causation in Science and the Methods of Scientific Discovery

Causation in Science and the Methods of Scientific Discovery PDF Author: Rani Lill Anjum
Publisher:
ISBN: 0198733666
Category : Philosophy
Languages : en
Pages : 295

Book Description
Causal questions are relevant to all sciences and social sciences, yet how we discover causal connections is no easy matter. Indeed, the choice of methods concerns the correct norms for the empirical study of the world. In this text, two experts on causation relate philosophical theory to scientific practice and propose nine new norms of discovery.

Sexual Segregation in Vertebrates

Sexual Segregation in Vertebrates PDF Author: Kathreen Ruckstuhl
Publisher: Cambridge University Press
ISBN: 9780521835220
Category : Psychology
Languages : en
Pages : 512

Book Description
Males and females of many species can, and do, live separately for long periods of time. This sexual segregation is widespread and can be on social, spatial or habitat scales. An understanding of sexual segregation is important in the explanation of life history and social preference, population dynamics and the conservation of rare species. Sexual Segregation in Vertebrates explores the reasons why this behaviour has evolved and what factors contribute to it.