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Bayesian Estimation and Inference in Computational Anatomy and Neuroimaging: Methods & Applications

Bayesian Estimation and Inference in Computational Anatomy and Neuroimaging: Methods & Applications PDF Author: Xiaoying Tang
Publisher: Frontiers Media SA
ISBN: 2889459845
Category :
Languages : en
Pages : 118

Book Description
Computational Anatomy (CA) is an emerging discipline aiming to understand anatomy by utilizing a comprehensive set of mathematical tools. CA focuses on providing precise statistical encodings of anatomy with direct application to a broad range of biological and medical settings. During the past two decades, there has been an ever-increasing pace in the development of neuroimaging techniques, delivering in vivo information on the anatomy and physiological signals of different human organs through a variety of imaging modalities such as MRI, x-ray, CT, and PET. These multi-modality medical images provide valuable data for accurate interpretation and estimation of various biological parameters such as anatomical labels, disease types, cognitive states, functional connectivity between distinct anatomical regions, as well as activation responses to specific stimuli. In the era of big neuroimaging data, Bayes’ theorem provides a powerful tool to deliver statistical conclusions by combining the current information and prior experience. When sufficiently good data is available, Bayes’ theorem can utilize it fully and provide statistical inferences/estimations with the least error rate. Bayes’ theorem arose roughly three hundred years ago and has seen extensive application in many fields of science and technology, including recent neuroimaging, ever since. The last fifteen years have seen a great deal of success in the application of Bayes’ theorem to the field of CA and neuroimaging. That said, given that the power and success of Bayes’ rule largely depends on the validity of its probabilistic inputs, it is still a challenge to perform Bayesian estimation and inference on the typically noisy neuroimaging data of the real world. We assembled contributions focusing on recent developments in CA and neuroimaging through Bayesian estimation and inference, in terms of both methodologies and applications. It is anticipated that the articles in this Research Topic will provide a greater insight into the field of Bayesian imaging analysis.

Bayesian Estimation and Inference in Computational Anatomy and Neuroimaging: Methods & Applications

Bayesian Estimation and Inference in Computational Anatomy and Neuroimaging: Methods & Applications PDF Author: Xiaoying Tang
Publisher: Frontiers Media SA
ISBN: 2889459845
Category :
Languages : en
Pages : 118

Book Description
Computational Anatomy (CA) is an emerging discipline aiming to understand anatomy by utilizing a comprehensive set of mathematical tools. CA focuses on providing precise statistical encodings of anatomy with direct application to a broad range of biological and medical settings. During the past two decades, there has been an ever-increasing pace in the development of neuroimaging techniques, delivering in vivo information on the anatomy and physiological signals of different human organs through a variety of imaging modalities such as MRI, x-ray, CT, and PET. These multi-modality medical images provide valuable data for accurate interpretation and estimation of various biological parameters such as anatomical labels, disease types, cognitive states, functional connectivity between distinct anatomical regions, as well as activation responses to specific stimuli. In the era of big neuroimaging data, Bayes’ theorem provides a powerful tool to deliver statistical conclusions by combining the current information and prior experience. When sufficiently good data is available, Bayes’ theorem can utilize it fully and provide statistical inferences/estimations with the least error rate. Bayes’ theorem arose roughly three hundred years ago and has seen extensive application in many fields of science and technology, including recent neuroimaging, ever since. The last fifteen years have seen a great deal of success in the application of Bayes’ theorem to the field of CA and neuroimaging. That said, given that the power and success of Bayes’ rule largely depends on the validity of its probabilistic inputs, it is still a challenge to perform Bayesian estimation and inference on the typically noisy neuroimaging data of the real world. We assembled contributions focusing on recent developments in CA and neuroimaging through Bayesian estimation and inference, in terms of both methodologies and applications. It is anticipated that the articles in this Research Topic will provide a greater insight into the field of Bayesian imaging analysis.

Statistical Parametric Mapping: The Analysis of Functional Brain Images

Statistical Parametric Mapping: The Analysis of Functional Brain Images PDF Author: William D. Penny
Publisher: Elsevier
ISBN: 0080466508
Category : Psychology
Languages : en
Pages : 689

Book Description
In an age where the amount of data collected from brain imaging is increasing constantly, it is of critical importance to analyse those data within an accepted framework to ensure proper integration and comparison of the information collected. This book describes the ideas and procedures that underlie the analysis of signals produced by the brain. The aim is to understand how the brain works, in terms of its functional architecture and dynamics. This book provides the background and methodology for the analysis of all types of brain imaging data, from functional magnetic resonance imaging to magnetoencephalography. Critically, Statistical Parametric Mapping provides a widely accepted conceptual framework which allows treatment of all these different modalities. This rests on an understanding of the brain's functional anatomy and the way that measured signals are caused experimentally. The book takes the reader from the basic concepts underlying the analysis of neuroimaging data to cutting edge approaches that would be difficult to find in any other source. Critically, the material is presented in an incremental way so that the reader can understand the precedents for each new development. This book will be particularly useful to neuroscientists engaged in any form of brain mapping; who have to contend with the real-world problems of data analysis and understanding the techniques they are using. It is primarily a scientific treatment and a didactic introduction to the analysis of brain imaging data. It can be used as both a textbook for students and scientists starting to use the techniques, as well as a reference for practicing neuroscientists. The book also serves as a companion to the software packages that have been developed for brain imaging data analysis. - An essential reference and companion for users of the SPM software - Provides a complete description of the concepts and procedures entailed by the analysis of brain images - Offers full didactic treatment of the basic mathematics behind the analysis of brain imaging data - Stands as a compendium of all the advances in neuroimaging data analysis over the past decade - Adopts an easy to understand and incremental approach that takes the reader from basic statistics to state of the art approaches such as Variational Bayes - Structured treatment of data analysis issues that links different modalities and models - Includes a series of appendices and tutorial-style chapters that makes even the most sophisticated approaches accessible

Brain Mapping

Brain Mapping PDF Author:
Publisher: Academic Press
ISBN: 0123973163
Category : Science
Languages : en
Pages : 2668

Book Description
Brain Mapping: A Comprehensive Reference, Three Volume Set offers foundational information for students and researchers across neuroscience. With over 300 articles and a media rich environment, this resource provides exhaustive coverage of the methods and systems involved in brain mapping, fully links the data to disease (presenting side by side maps of healthy and diseased brains for direct comparisons), and offers data sets and fully annotated color images. Each entry is built on a layered approach of the content – basic information for those new to the area and more detailed material for experienced readers. Edited and authored by the leading experts in the field, this work offers the most reputable, easily searchable content with cross referencing across articles, a one-stop reference for students, researchers and teaching faculty. Broad overview of neuroimaging concepts with applications across the neurosciences and biomedical research Fully annotated color images and videos for best comprehension of concepts Layered content for readers of different levels of expertise Easily searchable entries for quick access of reputable information Live reference links to ScienceDirect, Scopus and PubMed

Active Inference

Active Inference PDF Author: Thomas Parr
Publisher: MIT Press
ISBN: 0262362287
Category : Science
Languages : en
Pages : 313

Book Description
The first comprehensive treatment of active inference, an integrative perspective on brain, cognition, and behavior used across multiple disciplines. Active inference is a way of understanding sentient behavior—a theory that characterizes perception, planning, and action in terms of probabilistic inference. Developed by theoretical neuroscientist Karl Friston over years of groundbreaking research, active inference provides an integrated perspective on brain, cognition, and behavior that is increasingly used across multiple disciplines including neuroscience, psychology, and philosophy. Active inference puts the action into perception. This book offers the first comprehensive treatment of active inference, covering theory, applications, and cognitive domains. Active inference is a “first principles” approach to understanding behavior and the brain, framed in terms of a single imperative to minimize free energy. The book emphasizes the implications of the free energy principle for understanding how the brain works. It first introduces active inference both conceptually and formally, contextualizing it within current theories of cognition. It then provides specific examples of computational models that use active inference to explain such cognitive phenomena as perception, attention, memory, and planning.

Personalized Psychiatry

Personalized Psychiatry PDF Author: Ives Cavalcante Passos
Publisher: Springer
ISBN: 3030035530
Category : Medical
Languages : en
Pages : 190

Book Description
This book integrates the concepts of big data analytics into mental health practice and research. Mental disorders represent a public health challenge of staggering proportions. According to the most recent Global Burden of Disease study, psychiatric disorders constitute the leading cause of years lost to disability. The high morbidity and mortality related to these conditions are proportional to the potential for overall health gains if mental disorders can be more effectively diagnosed and treated. In order to fill these gaps, analysis in science, industry, and government seeks to use big data for a variety of problems, including clinical outcomes and diagnosis in psychiatry. Multiple mental healthcare providers and research laboratories are increasingly using large data sets to fulfill their mission. Briefly, big data is characterized by high volume, high velocity, variety and veracity of information, and to be useful it must be analyzed, interpreted, and acted upon. As such, focus has to shift to new analytical tools from the field of machine learning that will be critical for anyone practicing medicine, psychiatry and behavioral sciences in the 21st century. Big data analytics is gaining traction in psychiatric research, being used to provide predictive models for both clinical practice and public health systems. As compared with traditional statistical methods that provide primarily average group-level results, big data analytics allows predictions and stratification of clinical outcomes at an individual subject level. Personalized Psychiatry – Big Data Analytics in Mental Health provides a unique opportunity to showcase innovative solutions tackling complex problems in mental health using big data and machine learning. It represents an interesting platform to work with key opinion leaders to document current achievements, introduce new concepts as well as project the future role of big data and machine learning in mental health.

Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2009

Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2009 PDF Author: Guang-Zhong Yang
Publisher: Springer Science & Business Media
ISBN: 3642042708
Category : Computers
Languages : en
Pages : 1168

Book Description
The two-volume set LNCS 5761 and LNCS 5762 constitute the refereed proceedings of the 12th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2009, held in London, UK, in September 2009. Based on rigorous peer reviews, the program committee carefully selected 259 revised papers from 804 submissions for presentation in two volumes. The first volume includes 125 papers divided in topical sections on cardiovascular image guided intervention and robotics; surgical navigation and tissue interaction; intra-operative imaging and endoscopic navigation; motion modeling and image formation; image registration; modeling and segmentation; image segmentation and classification; segmentation and atlas based techniques; neuroimage analysis; surgical navigation and robotics; image registration; and neuroimage analysis: structure and function.

Handbook of Neuroengineering

Handbook of Neuroengineering PDF Author: Nitish V. Thakor
Publisher: Springer Nature
ISBN: 9811655405
Category : Technology & Engineering
Languages : en
Pages : 3686

Book Description
This Handbook serves as an authoritative reference book in the field of Neuroengineering. Neuroengineering is a very exciting field that is rapidly getting established as core subject matter for research and education. The Neuroengineering field has also produced an impressive array of industry products and clinical applications. It also serves as a reference book for graduate students, research scholars and teachers. Selected sections or a compendium of chapters may be used as “reference book” for a one or two semester graduate course in Biomedical Engineering. Some academicians will construct a “textbook” out of selected sections or chapters. The Handbook is also meant as a state-of-the-art volume for researchers. Due to its comprehensive coverage, researchers in one field covered by a certain section of the Handbook would find other sections valuable sources of cross-reference for information and fertilization of interdisciplinary ideas. Industry researchers as well as clinicians using neurotechnologies will find the Handbook a single source for foundation and state-of-the-art applications in the field of Neuroengineering. Regulatory agencies, entrepreneurs, investors and legal experts can use the Handbook as a reference for their professional work as well.​

Recent Advances and the Future Generation of Neuroinformatics Infrastructure

Recent Advances and the Future Generation of Neuroinformatics Infrastructure PDF Author: Xi Cheng
Publisher: Frontiers Media SA
ISBN: 2889196771
Category : Neurosciences. Biological psychiatry. Neuropsychiatry
Languages : en
Pages : 390

Book Description
The huge volume of multi-modal neuroimaging data across different neuroscience communities has posed a daunting challenge to traditional methods of data sharing, data archiving, data processing and data analysis. Neuroinformatics plays a crucial role in creating advanced methodologies and tools for the handling of varied and heterogeneous datasets in order to better understand the structure and function of the brain. These tools and methodologies not only enhance data collection, analysis, integration, interpretation, modeling, and dissemination of data, but also promote data sharing and collaboration. This Neuroinformatics Research Topic aims to summarize the state-of-art of the current achievements and explores the directions for the future generation of neuroinformatics infrastructure. The publications present solutions for data archiving, data processing and workflow, data mining, and system integration methodologies. Some of the systems presented are large in scale, geographically distributed, and already have a well-established user community. Some discuss opportunities and methodologies that facilitate large-scale parallel data processing tasks under a heterogeneous computational environment. We wish to stimulate on-going discussions at the level of the neuroinformatics infrastructure including the common challenges, new technologies of maximum benefit, key features of next generation infrastructure, etc. We have asked leading research groups from different research areas of neuroscience/neuroimaging to provide their thoughts on the development of a state of the art and highly-efficient neuroinformatics infrastructure. Such discussions will inspire and help guide the development of a state of the art, highly-efficient neuroinformatics infrastructure.

Habits: plasticity, learning and freedom

Habits: plasticity, learning and freedom PDF Author: Javier Bernacer
Publisher: Frontiers Media SA
ISBN: 2889196739
Category : Implicit learning
Languages : en
Pages : 150

Book Description
In present times, certain fields of science are becoming aware of the necessity to go beyond a restrictive specialization, and establish an open dialogue with other disciplines. Such is the case of the approach that neuroscience and philosophy are performing in the last decade. However, this increasing interest in a multidisciplinary perspective should not be understood, in our opinion, as a new phenomenon, but rather as a return to a classical standpoint: a proper understanding of human features –organic, cognitive, volitional, motor or behavioral, for example– requires a context that includes the global dimension of the human being. We believe that grand neuroscientific conclusions about the mind should take into account what philosophical reflection has said about it; likewise, philosophers should consider the organic constitution of the brain to draw inferences about the mind. Thus, both neuroscience and philosophy would benefit from each other’s achievements through a fruitful dialogue. One of the main problems a multidisciplinary group encounters is terminology: the same term has a different scope in various fields, sometimes even contradictory. Such is the case of habits: from a neuroscientific perspective, a habit is a mere automation of an action. It is, therefore, linked to rigidity and limitation. However, from a classical philosophical account, a habit is an enabling capacity acquired through practice, which facilitates, improves and reinforces the performance of certain kind of actions. From neuroscience, habit acquisition restricts a subject’s action to the learnt habit; from philosophy, habit acquisition allows the subject to set a distance from the simple motor performance to cognitively enrich the action. For example, playing piano is a technical habit; considering the neuroscientific account, a pianist would just play those sequences of keystrokes that had been repeatedly practiced in the past. However, according to the philosophical perspective, it would allow the pianist to improvise and, moreover, go beyond the movements of their hands to concentrate in other features of musical interpretation. In other words, a holistic view of habits focuses on the subject’s disposition when facing both known and novel situations. We believe neuroscience could contribute to achieve a deeper understanding of the neural bases of habits, whose complexity could be deciphered by a philosophical reflection. Thus, we propose this Research Topic to increase our understanding on habits from a wide point of view. This collection of new experimental research, empirical and theoretical reviews, general commentaries and opinion articles covers the following subjects: habit learning; implicit memory; computational and complex dynamical accounts of habit formation; practical, cognitive, perceptual and motor habits; early learning; intentionality; consciousness in habits performance; neurological and psychiatric disorders related to habits, such as obsessive-compulsive disorder, stereotypies or addiction; habits as enabling or limiting capacities for the agent

Effects of epilepsy on memory - therapeutic implications, biomarkers, and comorbidities

Effects of epilepsy on memory - therapeutic implications, biomarkers, and comorbidities PDF Author: Yvonne Höller
Publisher: Frontiers Media SA
ISBN: 2832509592
Category : Medical
Languages : en
Pages : 160

Book Description