Author: Yi Liu Publisher: ISBN: Category : Languages : en Pages :
Book Description
Surfaces/interfaces are omnipresent in nature, ranging from physics and chemistry to biology and material sciences. To characterize the interfacial structures and understand the surface phenomena, many useful tools have been developed. Vibrational sum frequency generation (VSFG) spectroscopy has proven to be a powerful second-order non-linear optical technique for this purpose and is gaining more and more attention nowadays. With VSFG, two pulsed laser beams, one at infrared frequency and one at visible frequency, are incident on the surface and generate a new beam with a frequency equal to the sum of the IR and visible frequencies. When the IR frequency matches a surface vibrational mode frequency, this process would be resonantly enhanced. In this dissertation, this surface-sensitive technique was adopted to investigate several interfaces with special relevance to biology. The first topic of interest is the unusual orientation of a strong protein stabilizer, trimethylamine N-oxide (TMAO), at two aqueous/hydrophobic interfaces (air/water interface and OTS/water interface). By interpretation of the relative phase of VSFG spectra coupled with a numerical algorithm, the maximum entropy method (MEM) anaylysis of the molecular orientation, it is found that the methyl groups of TMAO prefer to point into the aqueous medium, while the oxide moieties (N+-O-) orient towards the hydrophobic air or OTS. This unusual orientation may be attributed to the more hydrophilic nature of methyl groups that is attached to a strong electron withdrawing atom such as a quaternary nitrogen. These results could help elucidate the stabilizing effect of TMAO on proteins the increased need to keep the methyl group hydrated would cause them to be excluded from protein interface and thereby lead to protein stabilization.The other major issue focused in this dissertation is based on the ion specific interactions at a charged interface, which plays a decisive role in various physico-chemical and biological processes. Binding affinity of different cations to monolayers of amphiphilic molecules (e.g. fatty acids, phospholipids) at the air/aqueous surfactant interfaces, may provide molecular level clues on various functions of cell membranes that are resembled by these amphiphilic molecules. Specifically, the binding events of several alkali cations to the hydrophilic carboxylate headgroups of long chain fatty acid, inferred from interfacial water structures, are thoroughly investigated by VSFG measurement. Results show that Li+ binds strongest to the negatively charged carboxylate groups, followed by Na+, then K+ although the difference is slight. The ranking of the alkali metal cations' binding abilities differs from the sequence predicted by the law of match water affinities (LMWA) and also varies with different headgroups in the model system, which may suggest the distinct solvation behaviors of these ions. Such findings should help to elucidate the molecular-level binding behavior to proteins in aqueous solutions.
Author: Akihiro Morita Publisher: Springer ISBN: 9811316074 Category : Science Languages : en Pages : 275
Book Description
This book describes fundamental theory and recent advances of sum frequency generation (SFG) spectroscopy. SFG spectroscopy is widely used as a powerful tool of surface characterization, although theoretical interpretation of the obtained spectra has been a major bottleneck for most users. Recent advances in SFG theory have brought about a breakthrough in the analysis methods beyond conventional empirical ones, and molecular dynamics (MD) simulation of SFG spectroscopy allows for simultaneous understanding of observed spectra and interface structure in unprecedented detail. This book explains these recently understood theoretical aspects of SFG spectroscopy by the major developer of the theory. The theoretical topics are treated at basic levels for undergraduate students and are described in relation to computational chemistry, such as molecular modeling and MD simulation, toward close collaboration of SFG spectroscopy and computational chemistry in the near future.
Author: Wei Hua Publisher: ISBN: Category : Languages : en Pages : 219
Book Description
Abstract: Here, interface-specific nonlinear optical spectroscopies, conventional vibrational sum frequency generation (VSFG) and heterodyne-detected vibrational sum frequency generation (HD-VSFG), are employed to probe interfacial water molecules at the molecular level. HD-VSFG spectroscopy allows for direct interrogation of the average orientation of the transition dipole moment of interfacial water molecules that is intrinsically contained in the sign of the second-order nonlinear susceptibility, X(2). The water organization and ion distributions at air/aqueous interfaces of inorganic salt solutions are inferred from Im X(2) spectra obtained by HD-VSFG spectroscopy.
Author: Andrzej Wieckowski Publisher: John Wiley & Sons ISBN: 1118658965 Category : Science Languages : en Pages : 396
Book Description
Reviews the latest theory, techniques, and applications Surface vibrational spectroscopy techniques probe the structure and composition of interfaces at the molecular level. Their versatility, coupled with their non-destructive nature, enables in-situ measurements of operating devices and the monitoring of interface-controlled processes under reactive conditions. Vibrational Spectroscopy at Electrified Interfaces explores new and emerging applications of Raman, infrared, and non-linear optical spectroscopy for the study of charged interfaces. The book draws from hundreds of findings reported in the literature over the past decade. It features an internationally respected team of authors and editors, all experts in the field of vibrational spectroscopy at surfaces and interfaces. Content is divided into three parts: Part One, Nonlinear Vibrational Spectroscopy, explores properties of interfacial water, ions, and biomolecules at charged dielectric, metal oxide, and electronically conductive metal catalyst surfaces. In addition to offering plenty of practical examples, the chapters present the latest measurement and instrumental techniques. Part Two, Raman Spectroscopy, sets forth highly sensitive approaches for the detection of biomolecules at solid-liquid interfaces as well as the use of photon depolarization strategies to elucidate molecular orientation at surfaces. Part Three, IRRAS Spectroscopy (including PM-IRRAS), reports on wide-ranging systems from small fuel molecules at well-defined surfaces to macromolecular complexes that serve as the building blocks for functional interfaces in devices designed for chemical sensing and electric power generation. The Wiley Series on Electrocatalysis and Electrochemistry is dedicated to reviewing important advances in the field, exploring how these advances affect industry. The series defines what we currently know and can do with our knowledge of electrocatalysis and electrochemistry as well as forecasts where we can expect the field to be in the future.
Author: Soon Mi Lim Publisher: ISBN: Category : Languages : en Pages :
Book Description
Vibrational sum frequency spectroscopy (VSFS) is a nonlinear optical process. The sum frequency signal is proportional to the square of second order nonlinear susceptibility, which is proportional to the average of polarizabilities of molecules, which is related to molecular orientation. Since the polarizabilities of molecules in bulk phase will be canceled out, a sum frequency signal can only be generated from interfaces where the inversion symmetry is broken. Because of its interfacial specificity, VSFS has been applied to study many interfacial phenomena. In this dissertation we investigated various biological interfaces with VSFS. Fibrinogen adsorption was studied at the protein/solid interface in combination with atomic force microscopy (AFM), immunoassay, and VSFS. Astonishing changes in the interfacial water orientation accompanied by the pH changes provided fibrinogen0́9s adsorption mechanism up to the amino acid level. Enzymatic fragmentation of fibrinogen revealed that the adsorption property of fibrinogen was mainly from the alpha C fragments of the protein. Mimicking of the fibrinogen binding site with polypeptides was successfully performed and showed very similar properties of fibrinogen adsorption. Protein stability is sensitive to the salts in solutions. The ability of ions to stabilize protein was ordered by Hofmeister in 1888 and the order is SO42− =̃ HPO42−> F−> Cl−> Br−> NO3−> I− (=̃ ClO4−)> SCN−. Even though the phenomenon was observed in various biological systems, the origin of those ionic effects is still not well understood. We studied ion effects on alkyl chain ordering and interfacial water structure for octadecylamine, dimethyldidodecylammonium bromide, and dilauroylphosphotidyl choline monolayers. Because of its ability to probe a hydrophobic moiety and interfacial water at the same time, VSFS provided further information to understand the Hofmeister series. We found that the Hofmeister effect is a combinatorial effect of screening effects, ion binding, and dispersion forces.
Author: Fujie Tang Publisher: ISBN: 9789811389665 Category : Biological interfaces Languages : en Pages :
Book Description
This book focuses on the study of the interfacial water using molecular dynamics simulation and experimental sum frequency generation spectroscopy. It proposes a new definition of the free O-H groups at water-air interface and presents research on the structure and dynamics of these groups. Furthermore, it discusses the exponential decay nature of the orientation distribution of the free O-H groups of interfacial water and ascribes the origin of the down pointing free O-H groups to the presence of capillary waves on the surface. It also describes how, based on this new definition, a maximum surface H-bond density of around 200 K at ice surface was found, as the maximum results from two competing effects. Lastly, the book discusses the absorption of water molecules at the water-TiO2 interface. Providing insights into the combination of molecular dynamics simulation and experimental sum frequency generation spectroscopy, it is a valuable resource for researchers in the field.
Author: Dheeraj Kumar Singh Publisher: Springer Nature ISBN: 9813360844 Category : Technology & Engineering Languages : en Pages : 663
Book Description
The book highlights recent developments in the field of spectroscopy by providing the readers with an updated and high-level of overview. The focus of this book is on the introduction to concepts of modern spectroscopic techniques, recent technological innovations in this field, and current examples of applications to molecules and materials relevant for academia and industry. The book will be beneficial to researchers from various branches of science and technology, and is intended to point them to modern techniques, which might be useful for their specific problems. Spectroscopic techniques, that are discussed include, UV-Visible absorption spectroscopy, XPS, Raman spectroscopy, SERS, TERS, CARS, IR absorption spectroscopy, SFG, LIBS, Quantum cascade laser (QCL) spectroscopy, fluorescence spectroscopy, ellipsometry, cavity-enhanced absorption spectroscopy, such as cavity ring-down spectroscopy (CRDS) and evanescent wave-CRDS both in gas and condensed phases, time-resolved spectroscopy etc. Applications introduced in the different chapters demonstrates the usefulness of the spectroscopic techniques for the characterization of fundamental properties of molecules, e.g. in connection with environmental impact, bio-activity, or usefulness for pharmaceutical drugs, and materials important e.g. for nano-science, nuclear chemistry, or bio-applications. The book presents how spectroscopic techniques can help to better understand substances, which have also great impact on questions of social and economic relevance (environment, alternative energy, etc.).
Author: Publisher: ISBN: Category : Languages : en Pages : 140
Book Description
Sum frequency generation (SFG) vibrational spectroscopy has been used to study the interfacial structure of several polypeptides and amino acids adsorbed to hydrophobic and hydrophilic surfaces under a variety of experimental conditions. Peptide sequence, peptide chain length, peptide hydrophobicity, peptide side-chain type, surface hydrophobicity, and solution ionic strength all affect an adsorbed peptide's interfacial structure. Herein, it is demonstrated that with the choice of simple, model peptides and amino acids, surface specific SFG vibrational spectroscopy can be a powerful tool to elucidate the interfacial structure of these adsorbates. Herein, four experiments are described. In one, a series of isosequential amphiphilic peptides are synthesized and studied when adsorbed to both hydrophobic and hydrophilic surfaces. On hydrophobic surfaces of deuterated polystyrene, it was determined that the hydrophobic part of the peptide is ordered at the solid-liquid interface, while the hydrophilic part of the peptide appears to have a random orientation at this interface. On a hydrophilic surface of silica, it was determined that an ordered peptide was only observed if a peptide had stable secondary structure in solution. In another experiment, the interfacial structure of a model amphiphilic peptide was studied as a function of the ionic strength of the solution, a parameter that could change the peptide's secondary structure in solution. It was determined that on a hydrophobic surface, the peptide's interfacial structure was independent of its structure in solution. This was in contrast to the adsorbed structure on a hydrophilic surface, where the peptide's interfacial structure showed a strong dependence on its solution secondary structure. In a third experiment, the SFG spectra of lysine and proline amino acids on both hydrophobic and hydrophilic surfaces were obtained by using a different experimental geometry that increases the SFG signal. Upon comparison of these spectra to the SFG spectra of interfacial polylysine and polyproline it was determined that the interfacial structure of a peptide is strongly dependent on its chain length. Lastly, SFG spectroscopy has been extended to the Amide I vibrational mode of a peptide (which is sensitive to peptide secondary structure) by building a new optical parametric amplifier based on lithium thioindate. Evidence is presented that suggests that the interfacial secondary structure of a peptide can be perturbed by a surface.
Author: Publisher: ISBN: Category : Languages : en Pages : 22
Book Description
We demonstrate a theoretical description of vibrational sum frequency generation (SFG) at the boundary of aqueous electrolyte solutions. This approach identifies and exploits a simple relationship between SFG lineshapes and the statistics of molecular orientation and electric field. Our computer simulations indicate that orientational averages governing SFG susceptibility do not manifest ion-specific shifts in local electric field, but instead, ion-induced polarization of subsurface layers. Counterbalancing effects are obtained for monovalent anions and cations at the same depth. Ions held at different depths induce an imbalanced polarization, suggesting that ion-specific effects can arise from weak, long ranged influence on solvent organization.
Author: Yi Liu
Author: Akihiro Morita
Author: Wei Hua
Author: Andrzej Wieckowski
Author: Soon Mi Lim
Author: Quan Du
Author: Fujie Tang
Author: Dheeraj Kumar Singh
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