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The Effects of Dissolved Organic Matter Quality and Invertebrate Grazing on Microbial Films in Cave Streams

The Effects of Dissolved Organic Matter Quality and Invertebrate Grazing on Microbial Films in Cave Streams PDF Author:
Publisher:
ISBN:
Category : Biofilms
Languages : en
Pages : 68

Book Description


The Effects of Dissolved Organic Matter Quality and Invertebrate Grazing on Microbial Films in Cave Streams

The Effects of Dissolved Organic Matter Quality and Invertebrate Grazing on Microbial Films in Cave Streams PDF Author:
Publisher:
ISBN:
Category : Biofilms
Languages : en
Pages : 68

Book Description


Controls on Microbial Processing of Dissolved Organic Matter in Boreal Forest Streams

Controls on Microbial Processing of Dissolved Organic Matter in Boreal Forest Streams PDF Author: Marie Schmidt
Publisher:
ISBN:
Category : Extracellular enzymes
Languages : en
Pages : 128

Book Description
In the boreal forest, permafrost thaw is resulting in changes in vegetation and deepening of watershed flowpaths. Caribou-Poker Creeks Research Watershed contains sub-catchments underlain with varying permafrost extents (4-53% cover), providing the opportunity to study how permafrost extent affects water chemistry and nutrient cycling. I measured nitrogen (N), phosphorous (P), and carbon (C) processing ectoenzyme activity in the water column and sediment of headwater streams, and related ectoenzyme activity to nutrient and dissolved organic carbon (DOC) concentration. Additionally, I used nutrient diffusing substrata (NDS) to grow biofilms with enhanced inorganic N and P and labile C alone and in combination and measured ectoenzyme activity and respiration of biofilms in response to resource amendments. High P-processing enzyme activity across streams of the CPCRW indicated microbial P limitation. Respiration and organic matter processing enzymes of biofilms grown on NDS increased with labile C or labile C in combination with nutrient additions, implying that labile C limited or co-limited rates of DOM processing. Our results suggest that as climate warming and subsequent permafrost thaw alters terrestrial inputs of dissolved organic matter (DOM) and inorganic nutrients into streams, changes in inorganic P and labile C availability will control microbial processing of DOM.

Influence of Geological Variation on Dissolved Organic Matter Quality and Microbial Community Structure in Forested Stream Sediments

Influence of Geological Variation on Dissolved Organic Matter Quality and Microbial Community Structure in Forested Stream Sediments PDF Author: Jennifer June Mosher
Publisher:
ISBN:
Category :
Languages : en
Pages : 216

Book Description


The Effect of Inorganic Sediment on Stream Biota

The Effect of Inorganic Sediment on Stream Biota PDF Author: James Robert Gammon
Publisher:
ISBN:
Category : Sedimentation and deposition
Languages : en
Pages : 160

Book Description


Microbial Life of Cave Systems

Microbial Life of Cave Systems PDF Author: Annette Summers Engel
Publisher: Walter de Gruyter GmbH & Co KG
ISBN: 3110339889
Category : Nature
Languages : en
Pages : 352

Book Description
The earth's subsurface contains abundant and active microbial biomass, living in water, occupying pore space, and colonizing mineral and rock surfaces. Caves are one type of subsurface habitat, being natural, solutionally- or collapse-enlarged openings in rock. Within the past 30 years, there has been an increase in the number of microbiology studies from cave environments to understand cave ecology, cave geology, and even the origins of life. By emphasizing the microbial life of caves, and the ecological processes and geological consequences attributed to microbes, this book provides the first authoritative and comprehensive account of the microbial life of caves for students, professionals, and general readers.

Cave Microbiomes: A Novel Resource for Drug Discovery

Cave Microbiomes: A Novel Resource for Drug Discovery PDF Author: Naowarat Cheeptham
Publisher: Springer Science & Business Media
ISBN: 1461452066
Category : Medical
Languages : en
Pages : 143

Book Description
This book details recent findings in the field of cave microbiology and builds on fast-paced efforts to exploit an unconventional and underexplored environment for new microorganisms which may provide an untapped source of drugs: microorganisms from caves.

Impact of the Flow Velocity and Sedimentation on Microbial Biofilms in the Stream Ilm (Thuringia/Germany)

Impact of the Flow Velocity and Sedimentation on Microbial Biofilms in the Stream Ilm (Thuringia/Germany) PDF Author: Elisabeth Pohlon
Publisher:
ISBN:
Category :
Languages : en
Pages : 310

Book Description


Microbial Metabolism of Dissolved Organic Carbon in Stream Hyporheic Zones

Microbial Metabolism of Dissolved Organic Carbon in Stream Hyporheic Zones PDF Author: William V. Sobczak
Publisher:
ISBN:
Category :
Languages : en
Pages : 488

Book Description


Coupling the Effects of Dissolved Organic Matter and Nutrient Stoichiometry with Nutrient Uptake in Boreal Forest Headwater Streams

Coupling the Effects of Dissolved Organic Matter and Nutrient Stoichiometry with Nutrient Uptake in Boreal Forest Headwater Streams PDF Author: Dana Fjare
Publisher:
ISBN:
Category : Cold regions forestry
Languages : en
Pages : 154

Book Description
Discontinuous permafrost affects the hydrology and distribution of vegetation in boreal forest watersheds, which in turn influence stream water chemistry. I investigated how loss of discontinuous permafrost with projected climate change might affect nutrient cycling in boreal forest headwater streams. I hypothesized that 1) the carbon, nitrogen, and phosphorus (C:N:P) ratio in dissolved organic matter (DOM) affects nutrient uptake due to stoichiometric constraints on autotrophic and heterotrophic nutrient assimilation, and 2) labile DOM affects nutrient uptake by increasing heterotrophic production. I tested my hypotheses using a series of instantaneous nutrient additions in nine headwater streams, with a factorial design manipulating both nutrient stoichiometry and DOM source. DOM was added as either acetate or leachate from birch leaves. Ambient nutrient uptake velocity (Vf-amb) was within the upper range of previously published literature values, ranging from 4.1-67.2 mm/min for N, 4.0-25.0 mm/min for P, and 4.2-34.5 mm/min for acetate. Uptake efficiency was similar for N and P added alone, in co-additions, and with DOM. Acetate and birch-DOM had similar effects on nutrient uptake, because both were sources of highly labile carbon. In 30-day laboratory bioavailability assays, birch and acetate-DOM exhibited ≥ 70% carbon loss. Vf-amb was in part explained by ambient stream chemistry, with Vf-amb for N weakly positively correlated with ambient P concentration, while Vf-amb for P and acetate was weakly negatively correlated with ambient N and ambient dissolved organic carbon, respectively. Consequently, inorganic nutrient availability may affect uptake of solutes as well as DOM lability. High demand for nutrients in boreal forest headwater streams suggests that uptake could increase concurrently with greater inorganic nutrient flux following a loss in permafrost extent.

Bacterial Diversity and Function Within an Epigenic Cave System and Implications for Other Limestone Cave Systems

Bacterial Diversity and Function Within an Epigenic Cave System and Implications for Other Limestone Cave Systems PDF Author: Kathleen Merritt Brannen-Donnelly
Publisher:
ISBN:
Category : Bacteria
Languages : en
Pages : 205

Book Description
There are approximately 48,000 known cave systems in the United States of America, with caves formed in carbonate karst terrains being the most common. Epigenic systems develop from the downward flow of meteoric water through carbonate bedrock and the solutional enlargement of interconnected subsurface conduits. Despite carbonate karst aquifers being globally extensive and important drinking water sources, microbial diversity and function are poorly understood compared to other Earth environments. After several decades of research, studies have shown that microorganisms in caves affect water quality, rates of carbonate dissolution and precipitation, and ecosystem nutrition through organic matter cycling. However, limited prior knowledge exists for the most common system, epigenic caves, regarding microbial taxonomic diversity, their metabolic capabilities, and how community function changes during and following environmental disturbances. To evaluate community development and succession, as well as potential roles in organic matter cycling, bacteria from the Cascade Cave System (CCS) in Kentucky were investigated. From geochemical and metagenomic data collected during a five-month colonization experiment, taxonomically distinct planktonic and sediment-attached bacterial communities formed along the epigenic cave stream. This represents one of the largest metagenomic studies done from any cave. Betaproteobacteria, Gammaproteobacteria, Alphaproteobacteria, and Opitutae were the most abundant groups. Planktonic bacteria pioneered sediment-attached communities, likely attributed to functional differences related to cell motility and attachment. Organic matter cycling affected exogenous heterotrophic community composition and function downstream because of diminished organic matter quality over time. This was reflected in significantly different abundances of genes encoding for carbohydrate and lignin degradation between habitats and depending on cave location. The ubiquity of environmental controls on bacteria functional diversity in karst is unknown because these environments have generally been left out of microbial biogeography research. In spatial meta-analyses of bacterial diversity data from global cave systems, the ubiquity of some bacteria in karst is evident. Despite evidence for undersampling and difficulties comparing sequencing technologies and strategies, some caves appear to have novel lineages while other caves have taxonomically similar communities despite being 1000s of kilometers apart. The implications are that microbes in karst (i.e., carbonate) caves around the world are functionally comparable.