Survival Analysis with Python PDF Download

Author: Avishek Nag
Publisher: CRC Press
ISBN: 1000520676
Category : Computers
Languages : en
Pages : 94

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Book Description
Survival analysis uses statistics to calculate time to failure. Survival Analysis with Python takes a fresh look at this complex subject by explaining how to use the Python programming language to perform this type of analysis. As the subject itself is very mathematical and full of expressions and formulations, the book provides detailed explanations and examines practical implications. The book begins with an overview of the concepts underpinning statistical survival analysis. It then delves into Parametric models with coverage of Concept of maximum likelihood estimate (MLE) of a probability distribution parameter MLE of the survival function Common probability distributions and their analysis Analysis of exponential distribution as a survival function Analysis of Weibull distribution as a survival function Derivation of Gumbel distribution as a survival function from Weibull Non-parametric models including Kaplan–Meier (KM) estimator, a derivation of expression using MLE Fitting KM estimator with an example dataset, Python code and plotting curves Greenwood’s formula and its derivation Models with covariates explaining The concept of time shift and the accelerated failure time (AFT) model Weibull-AFT model and derivation of parameters by MLE Proportional Hazard (PH) model Cox-PH model and Breslow’s method Significance of covariates Selection of covariates The Python lifelines library is used for coding examples. By mapping theory to practical examples featuring datasets, this book is a hands-on tutorial as well as a handy reference.

Author: Keith McNulty
Publisher: CRC Press
ISBN: 1000427897
Category : Business & Economics
Languages : en
Pages : 272

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Book Description
Despite the recent rapid growth in machine learning and predictive analytics, many of the statistical questions that are faced by researchers and practitioners still involve explaining why something is happening. Regression analysis is the best ‘swiss army knife’ we have for answering these kinds of questions. This book is a learning resource on inferential statistics and regression analysis. It teaches how to do a wide range of statistical analyses in both R and in Python, ranging from simple hypothesis testing to advanced multivariate modelling. Although it is primarily focused on examples related to the analysis of people and talent, the methods easily transfer to any discipline. The book hits a ‘sweet spot’ where there is just enough mathematical theory to support a strong understanding of the methods, but with a step-by-step guide and easily reproducible examples and code, so that the methods can be put into practice immediately. This makes the book accessible to a wide readership, from public and private sector analysts and practitioners to students and researchers. Key Features: 16 accompanying datasets across a wide range of contexts (e.g. academic, corporate, sports, marketing) Clear step-by-step instructions on executing the analyses Clear guidance on how to interpret results Primary instruction in R but added sections for Python coders Discussion exercises and data exercises for each of the main chapters Final chapter of practice material and datasets ideal for class homework or project work.

Author: Gareth James
Publisher: Springer Nature
ISBN: 3031387473
Category : Mathematics
Languages : en
Pages : 617

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Book Description
An Introduction to Statistical Learning provides an accessible overview of the field of statistical learning, an essential toolset for making sense of the vast and complex data sets that have emerged in fields ranging from biology to finance, marketing, and astrophysics in the past twenty years. This book presents some of the most important modeling and prediction techniques, along with relevant applications. Topics include linear regression, classification, resampling methods, shrinkage approaches, tree-based methods, support vector machines, clustering, deep learning, survival analysis, multiple testing, and more. Color graphics and real-world examples are used to illustrate the methods presented. This book is targeted at statisticians and non-statisticians alike, who wish to use cutting-edge statistical learning techniques to analyze their data. Four of the authors co-wrote An Introduction to Statistical Learning, With Applications in R (ISLR), which has become a mainstay of undergraduate and graduate classrooms worldwide, as well as an important reference book for data scientists. One of the keys to its success was that each chapter contains a tutorial on implementing the analyses and methods presented in the R scientific computing environment. However, in recent years Python has become a popular language for data science, and there has been increasing demand for a Python-based alternative to ISLR. Hence, this book (ISLP) covers the same materials as ISLR but with labs implemented in Python. These labs will be useful both for Python novices, as well as experienced users.

Author: José Unpingco
Publisher: Springer
ISBN: 3030185451
Category : Technology & Engineering
Languages : en
Pages : 396

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Book Description
This book, fully updated for Python version 3.6+, covers the key ideas that link probability, statistics, and machine learning illustrated using Python modules in these areas. All the figures and numerical results are reproducible using the Python codes provided. The author develops key intuitions in machine learning by working meaningful examples using multiple analytical methods and Python codes, thereby connecting theoretical concepts to concrete implementations. Detailed proofs for certain important results are also provided. Modern Python modules like Pandas, Sympy, Scikit-learn, Tensorflow, and Keras are applied to simulate and visualize important machine learning concepts like the bias/variance trade-off, cross-validation, and regularization. Many abstract mathematical ideas, such as convergence in probability theory, are developed and illustrated with numerical examples. This updated edition now includes the Fisher Exact Test and the Mann-Whitney-Wilcoxon Test. A new section on survival analysis has been included as well as substantial development of Generalized Linear Models. The new deep learning section for image processing includes an in-depth discussion of gradient descent methods that underpin all deep learning algorithms. As with the prior edition, there are new and updated *Programming Tips* that the illustrate effective Python modules and methods for scientific programming and machine learning. There are 445 run-able code blocks with corresponding outputs that have been tested for accuracy. Over 158 graphical visualizations (almost all generated using Python) illustrate the concepts that are developed both in code and in mathematics. We also discuss and use key Python modules such as Numpy, Scikit-learn, Sympy, Scipy, Lifelines, CvxPy, Theano, Matplotlib, Pandas, Tensorflow, Statsmodels, and Keras. This book is suitable for anyone with an undergraduate-level exposure to probability, statistics, or machine learning and with rudimentary knowledge of Python programming.

Author: David G. Kleinbaum
Publisher: Springer Science & Business Media
ISBN: 1475725558
Category : Medical
Languages : en
Pages : 332

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Book Description
A straightforward and easy-to-follow introduction to the main concepts and techniques of the subject. It is based on numerous courses given by the author to students and researchers in the health sciences and is written with such readers in mind. A "user-friendly" layout includes numerous illustrations and exercises and the book is written in such a way so as to enable readers learn directly without the assistance of a classroom instructor. Throughout, there is an emphasis on presenting each new topic backed by real examples of a survival analysis investigation, followed up with thorough analyses of real data sets. Each chapter concludes with practice exercises to help readers reinforce their understanding of the concepts covered, before going on to a more comprehensive test. Answers to both are included. Readers will enjoy David Kleinbaums style of presentation, making this an excellent introduction for all those coming to the subject for the first time.

Author: Tshepo Chris Nokeri
Publisher: Apress
ISBN: 9781484277614
Category : Mathematics
Languages : en
Pages : 119

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Book Description
Apply supervised and unsupervised learning to solve practical and real-world big data problems. This book teaches you how to engineer features, optimize hyperparameters, train and test models, develop pipelines, and automate the machine learning (ML) process. The book covers an in-memory, distributed cluster computing framework known as PySpark, machine learning framework platforms known as scikit-learn, PySpark MLlib, H2O, and XGBoost, and a deep learning (DL) framework known as Keras. The book starts off presenting supervised and unsupervised ML and DL models, and then it examines big data frameworks along with ML and DL frameworks. Author Tshepo Chris Nokeri considers a parametric model known as the Generalized Linear Model and a survival regression model known as the Cox Proportional Hazards model along with Accelerated Failure Time (AFT). Also presented is a binary classification model (logistic regression) and an ensemble model (Gradient Boosted Trees). The book introduces DL and an artificial neural network known as the Multilayer Perceptron (MLP) classifier. A way of performing cluster analysis using the K-Means model is covered. Dimension reduction techniques such as Principal Components Analysis and Linear Discriminant Analysis are explored. And automated machine learning is unpacked. This book is for intermediate-level data scientists and machine learning engineers who want to learn how to apply key big data frameworks and ML and DL frameworks. You will need prior knowledge of the basics of statistics, Python programming, probability theories, and predictive analytics. What You Will Learn Understand widespread supervised and unsupervised learning, including key dimension reduction techniques Know the big data analytics layers such as data visualization, advanced statistics, predictive analytics, machine learning, and deep learning Integrate big data frameworks with a hybrid of machine learning frameworks and deep learning frameworks Design, build, test, and validate skilled machine models and deep learning models Optimize model performance using data transformation, regularization, outlier remedying, hyperparameter optimization, and data split ratio alteration Who This Book Is For Data scientists and machine learning engineers with basic knowledge and understanding of Python programming, probability theories, and predictive analytics

Author: Allen B. Downey
Publisher: "O'Reilly Media, Inc."
ISBN: 1491907363
Category : Computers
Languages : en
Pages : 284

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Book Description
If you know how to program, you have the skills to turn data into knowledge, using tools of probability and statistics. This concise introduction shows you how to perform statistical analysis computationally, rather than mathematically, with programs written in Python. By working with a single case study throughout this thoroughly revised book, you’ll learn the entire process of exploratory data analysis—from collecting data and generating statistics to identifying patterns and testing hypotheses. You’ll explore distributions, rules of probability, visualization, and many other tools and concepts. New chapters on regression, time series analysis, survival analysis, and analytic methods will enrich your discoveries. Develop an understanding of probability and statistics by writing and testing code Run experiments to test statistical behavior, such as generating samples from several distributions Use simulations to understand concepts that are hard to grasp mathematically Import data from most sources with Python, rather than rely on data that’s cleaned and formatted for statistics tools Use statistical inference to answer questions about real-world data

Author: Paul David Allison
Publisher: SAGE
ISBN: 9780803920552
Category : History
Languages : en
Pages : 92

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Book Description
Drawing on recent "event history" analytical methods from biostatistics, engineering, and sociology, this clear and comprehensive monograph explains how longitudinal data can be used to study the causes of deaths, crimes, wars, and many other human events. Allison shows why ordinary multiple regression is not suited to analyze event history data, and demonstrates how innovative regression - like methods can overcome this problem. He then discusses the particular new methods that social scientists should find useful.

Author: Przemyslaw Biecek
Publisher: CRC Press
ISBN: 0429651376
Category : Business & Economics
Languages : en
Pages : 312

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Book Description
Explanatory Model Analysis Explore, Explain and Examine Predictive Models is a set of methods and tools designed to build better predictive models and to monitor their behaviour in a changing environment. Today, the true bottleneck in predictive modelling is neither the lack of data, nor the lack of computational power, nor inadequate algorithms, nor the lack of flexible models. It is the lack of tools for model exploration (extraction of relationships learned by the model), model explanation (understanding the key factors influencing model decisions) and model examination (identification of model weaknesses and evaluation of model's performance). This book presents a collection of model agnostic methods that may be used for any black-box model together with real-world applications to classification and regression problems.

Author: Luca Massaron
Publisher: Packt Publishing Ltd
ISBN: 1783980745
Category : Computers
Languages : en
Pages : 312

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Book Description
Learn the art of regression analysis with Python About This Book Become competent at implementing regression analysis in Python Solve some of the complex data science problems related to predicting outcomes Get to grips with various types of regression for effective data analysis Who This Book Is For The book targets Python developers, with a basic understanding of data science, statistics, and math, who want to learn how to do regression analysis on a dataset. It is beneficial if you have some knowledge of statistics and data science. What You Will Learn Format a dataset for regression and evaluate its performance Apply multiple linear regression to real-world problems Learn to classify training points Create an observation matrix, using different techniques of data analysis and cleaning Apply several techniques to decrease (and eventually fix) any overfitting problem Learn to scale linear models to a big dataset and deal with incremental data In Detail Regression is the process of learning relationships between inputs and continuous outputs from example data, which enables predictions for novel inputs. There are many kinds of regression algorithms, and the aim of this book is to explain which is the right one to use for each set of problems and how to prepare real-world data for it. With this book you will learn to define a simple regression problem and evaluate its performance. The book will help you understand how to properly parse a dataset, clean it, and create an output matrix optimally built for regression. You will begin with a simple regression algorithm to solve some data science problems and then progress to more complex algorithms. The book will enable you to use regression models to predict outcomes and take critical business decisions. Through the book, you will gain knowledge to use Python for building fast better linear models and to apply the results in Python or in any computer language you prefer. Style and approach This is a practical tutorial-based book. You will be given an example problem and then supplied with the relevant code and how to walk through it. The details are provided in a step by step manner, followed by a thorough explanation of the math underlying the solution. This approach will help you leverage your own data using the same techniques.