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Structural and Functional Analysis of Chemokine Interactions with Glycosaminoglycans and Chemokine Receptors

Structural and Functional Analysis of Chemokine Interactions with Glycosaminoglycans and Chemokine Receptors PDF Author: Catherina L. Salanga
Publisher:
ISBN: 9781124703862
Category :
Languages : en
Pages : 288

Book Description
Chemokines are involved in cell migration and activation during routine immune surveillance, inflammation and even cancer metastasis. The migration of chemokine receptor-bearing cells, including leukocytes and tumor cells, occurs in response to the secretion of chemokines, which accumulate on cell surfaces through interaction with glycosaminoglycans (GAGs) where they effectively serve as traffic signals to guide cell movement. Engagement of chemokines with their receptors subsequently causes the activation of signaling pathways that result in firm adhesion and extravasation of the cell into tissue, and in the case of leukocytes, activation of defense mechanisms. However, in cancer cells, the signaling pathways can be exploited or redirected, resulting in responses like survival, growth and proliferation. Herein, a structural and functional approach was used to address specific questions about the interactions of chemokines (i) with GAGs and (ii) with chemokine receptors in the context of cancer. Technically, the use of mass spectrometry has been a strong theme throughout these studies. In Chapter 2, a novel application of hydroxyl radical footprinting coupled with mass spectrometry was used to characterize the GAG binding specificity of the chemokine, MCP-3/CCL7. Potential GAG binding epitopes, identified by mass spectrometry, were then validated by mutagenesis and functional assays. In Chapter 3 and 4, a phosphoproteomic mass spectrometry strategy was used to elucidate CXCL12-mediated survival signaling through the receptor, CXCR4, in cells from patients with chronic lymphocytic leukemia (CLL). While signaling cascades involved in chemokine-mediated migration are well established, pathways involved in cell survival and proliferation in cancer, are not. Methods developed for phosphopeptide enrichment, and subsequent analysis via mass spectrometry are described in Chapter 3, and interesting/novel phosphoproteins, potentially involved in CXCL12-mediated CLL survival are described in Chapter 4. In Chapter 5, a functional approach was taken to elucidate the roles of receptors CXCR4 and CXCR7 in breast cancer growth and metastasis. The data show that CXCR7 affects the functional activity of CXCR4 in vitro, and decreases the extent of lung metastases in vivo, without inhibiting primary tumor growth. Overall, these studies serve to better understand some of the regulatory mechanisms that control chemokine function in normal physiology and in cancer.

Structural and Functional Analysis of Chemokine Interactions with Glycosaminoglycans and Chemokine Receptors

Structural and Functional Analysis of Chemokine Interactions with Glycosaminoglycans and Chemokine Receptors PDF Author: Catherina L. Salanga
Publisher:
ISBN: 9781124703862
Category :
Languages : en
Pages : 288

Book Description
Chemokines are involved in cell migration and activation during routine immune surveillance, inflammation and even cancer metastasis. The migration of chemokine receptor-bearing cells, including leukocytes and tumor cells, occurs in response to the secretion of chemokines, which accumulate on cell surfaces through interaction with glycosaminoglycans (GAGs) where they effectively serve as traffic signals to guide cell movement. Engagement of chemokines with their receptors subsequently causes the activation of signaling pathways that result in firm adhesion and extravasation of the cell into tissue, and in the case of leukocytes, activation of defense mechanisms. However, in cancer cells, the signaling pathways can be exploited or redirected, resulting in responses like survival, growth and proliferation. Herein, a structural and functional approach was used to address specific questions about the interactions of chemokines (i) with GAGs and (ii) with chemokine receptors in the context of cancer. Technically, the use of mass spectrometry has been a strong theme throughout these studies. In Chapter 2, a novel application of hydroxyl radical footprinting coupled with mass spectrometry was used to characterize the GAG binding specificity of the chemokine, MCP-3/CCL7. Potential GAG binding epitopes, identified by mass spectrometry, were then validated by mutagenesis and functional assays. In Chapter 3 and 4, a phosphoproteomic mass spectrometry strategy was used to elucidate CXCL12-mediated survival signaling through the receptor, CXCR4, in cells from patients with chronic lymphocytic leukemia (CLL). While signaling cascades involved in chemokine-mediated migration are well established, pathways involved in cell survival and proliferation in cancer, are not. Methods developed for phosphopeptide enrichment, and subsequent analysis via mass spectrometry are described in Chapter 3, and interesting/novel phosphoproteins, potentially involved in CXCL12-mediated CLL survival are described in Chapter 4. In Chapter 5, a functional approach was taken to elucidate the roles of receptors CXCR4 and CXCR7 in breast cancer growth and metastasis. The data show that CXCR7 affects the functional activity of CXCR4 in vitro, and decreases the extent of lung metastases in vivo, without inhibiting primary tumor growth. Overall, these studies serve to better understand some of the regulatory mechanisms that control chemokine function in normal physiology and in cancer.

Structural and Functional Analysis of the Chemokine CCL27 and the Expression and Purification of Silent Chemokine Receptors D6 and DARC

Structural and Functional Analysis of the Chemokine CCL27 and the Expression and Purification of Silent Chemokine Receptors D6 and DARC PDF Author: Ariane L. Jansma
Publisher:
ISBN:
Category :
Languages : en
Pages : 206

Book Description
Chemokines are small chemoattractant proteins that function by binding to G-protein coupled receptors (GPCRs) on a wide variety of cell types, triggering cascades of intracellular signaling pathways. While they are best known for their role in leukocyte migration, both in standard immune surveillance and maintenance, as well as in response to inflammation, chemokines are involved in a variety of physiological and pathophysiological processes. In addition to their complex function, the chemokine network itself is highly complex, with some chemokines being specific to one receptor, while others activate multiple receptors expressed on different cell types and in some cases, resulting in very different cellular responses. This project in part involves the chemokine CCL27, which is expressed in skin and selectively chemoattracts CLA memory T cells expressing the chemokine receptor, CCR10. The first set of aims for this project involved a comprehensive analysis of the structural and functional mechanism contributing to the biological diversity of CCL27. This was accomplished through a biophysical characterization of the oligomerization properties, residues targeting receptor activation, as well as sites of glycosaminoglycan (GAG) interactions for this chemokine. The results suggest that CCL27 exists in multiple oligomeric states, and its unique oligomerization patterns appear to play a role in the diversity of its multiple binding partners. The second major project aim involves optimization of the expression and purification of the silent chemokine receptors D6 and the Duffy Antigen Receptor for Chemokines (DARC). D6 and DARC are termed silent receptors because they bind many chemokines with high affinity and specificity, but unlike other chemokine receptors, they do not signal through G-proteins. Instead, they act as regulators, either by targeting their chemokine ligands for degradation, or by shuttling them from one location to another. One of the rate-limiting steps in the biophysical characterization of 7-transmembrane helical chemokine receptors is obtaining sufficient amounts of purified, functional protein. In this project, a tetracycline-indicuble mammalian cell expression system is applied to both D6 and DARC. Results from the initial test expressions and purifications indicate that this method was successful in generating solubilized receptor protein.

Chemokine-Glycosaminoglycan Interactions

Chemokine-Glycosaminoglycan Interactions PDF Author: Alexandra R. Lucas
Publisher: Springer Nature
ISBN: 1071628356
Category : Medical
Languages : en
Pages : 271

Book Description
This detailed volume provides methods to guide assay development, procedures designed to investigate the chemokine and glycosaminoglycan (GAG) networks, as well as their interactions, in a wide range of organs and tissues in disease and in health. The initial chapters in this book present in vivo models used to examine the roles of chemokines and GAGs in normal physiology and in the pathophysiology of disease. The book then explores present cell- and tissue-based in vitro assays to examine chemokine:GAG interactions. Finally, analytic approaches are presented that provide assays for measuring GAGs, chemokines, and cellular responses. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step and readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Chemokine-Glycosaminoglycan Interactions: Methods and Protocols serves as an ideal guide for researchers seeking to analyze chemokine and GAG functions, interactions, and molecular mechanisms in vivo and in vitro.

Regulation of Chemokine- Receptor Interactions and Functions

Regulation of Chemokine- Receptor Interactions and Functions PDF Author: Martin J. Stone
Publisher: MDPI
ISBN: 3038427284
Category : Medical
Languages : en
Pages : 229

Book Description
This book is a printed edition of the Special Issue "Regulation of Chemokine-Receptor Interactions and Functions" that was published in IJMS

Structural and proteomical analysis of the interaction of chemokines with glycosaminoglycans

Structural and proteomical analysis of the interaction of chemokines with glycosaminoglycans PDF Author: Tommy Hofmann
Publisher:
ISBN:
Category :
Languages : de
Pages :

Book Description


The Chemokine Receptors

The Chemokine Receptors PDF Author: Jeffrey K. Harrison
Publisher: Springer Science & Business Media
ISBN: 1597450200
Category : Medical
Languages : en
Pages : 412

Book Description
This volume, new to The Receptors series, focuses on several areas, including the birth, maturation, and structure of Chemokines; Neutrophil, Dendritic, and Lymphocyte trafficking; and Chemokine Receptors in diseases such as AIDs and lung cancer. In particular the book contains cutting-edge information ranging from basic molecular and cellular mechanisms to physiological and pathological roles of chemokines.

Regulation of Chemokine- Receptor Interactions and Functions

Regulation of Chemokine- Receptor Interactions and Functions PDF Author: Martin J. Stone (Ed.)
Publisher:
ISBN:
Category : Biochemistry
Languages : en
Pages : 228

Book Description
A hallmark of inflammation is the accumulation of leukocytes, which can serve to remove pathogens and necrotic tissue, but may also damage healthy tissue and exacerbate the inflammatory response. Our understanding of leukocyte recruitment in inflammation was revolutionized in the late 1980s by the discovery of chemokines (chemotactic cytokines), a family of small, secreted proteins that induce migration of selective subsets of leukocytes. Shortly afterwards, chemokines were found to exert their functions through the now familiar chemokine receptors, members of the G protein-coupled receptor superfamily. As their physiological and pathological functions were elucidated, chemokine receptors have become popular targets for drug development in inflammatory diseases as well as cancer metastasis and HIV infection. Extensive research has revealed that the functions of chemokines and their receptors are regulated at numerous levels, including: genetic mutations/polymorphisms; control of expression levels; ligand internalization via functional or decoy receptors; intrinsic selectivity of chemokine-receptor binding; hetero- or homo-oligomerization of chemokines or of receptors; alternative signalling pathways; interaction of chemokines with glycosaminoglycans; post-translational modifications; and binding to pathogen-derived inhibitors. This Special Issue of IJMS focused on the natural and pharmacological mechanisms by which the activities of chemokines and their receptors can be regulated.

Glycosaminoglycans and Proteoglycans

Glycosaminoglycans and Proteoglycans PDF Author: 978-3-03842-836-7
Publisher: MDPI
ISBN: 3038428353
Category : Medical
Languages : en
Pages : 247

Book Description
This book is a printed edition of the Special Issue "Glycosaminoglycans and Proteoglycans" that was published in Pharmaceuticals

Nuclear Magnetic Resonance of Biological Macromolecules, Part A

Nuclear Magnetic Resonance of Biological Macromolecules, Part A PDF Author: Thomas L. James
Publisher: Academic Press
ISBN:
Category : Science
Languages : en
Pages : 528

Book Description
This volume and its companion, Volume 339, supplement Volumes 176, 177, 239, and 261. Chapters are written with a "hands-on" perspective. That is, practical applications with critical evaluations of methodologies and experimental considerations needed to design, execute, and interpret NMR experiments pertinent to biological molecules.

Chemokines, Part B

Chemokines, Part B PDF Author:
Publisher: Academic Press
ISBN: 0080956963
Category : Science
Languages : en
Pages : 501

Book Description
The understanding of chemokines, the proteins that control the migration of cells, and their receptors, is critical to the study of causes and therapies for a wide range of human diseases and infections, including certain types of cancer, inflammatory diseases, HIV, and malaria. This volume, focusing on chemokine structure and function, as well as signaling, and its companion volume (Methods in Enzymology volume 461, focusing on chemokines as potential targets for disease intervention) provide a comprehensive overview and time-tested protocols in this field, making it an essential reference for researchers in the area. - Along with its companion volume, provides a comprehensive overview of chemokine methods, specifically as related to potential disease therapy - Gathers tried, tested, and trusted methods and techniques from top players in chemokine research - Provides an essential reference for researchers in the field