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Réponse des bactéries marines au rayonnement ultraviolet-visible et aux modifications photochimiques de la matière organique dissoute

Réponse des bactéries marines au rayonnement ultraviolet-visible et aux modifications photochimiques de la matière organique dissoute PDF Author: Maher Abboudi
Publisher:
ISBN:
Category :
Languages : en
Pages : 168

Book Description
In the marine environment, solar radiation can directly affect the activity of heterotrophic bacteria by causing various cellular damages or indirectly by modifying photochemically the dissolved organic matter (DOM). These various aspects were studied by determining experimentally the contribution of ultraviolet-B (UVR-B: 280-315 nm), ultraviolet-A (UVR-A: 315-400 nm) radiations as well as visible light (VIS: 400-700 nm) on DOM consumption by natural assemblages in various environments in the Northwestern Mediterranean Sea and by the marine bacterium, Vibrio angustum . We studied the effects of the photochemical transformations of DOM on the bacterial activity including production (BP), respiration (BR), bacterial growth efficiency (BGE) as well as the bacterial diversity, in two lagoons (Leucate and Canet) and in a coastal environment (Bay of Banyuls) in the Northwesternern Mediterranean Sea. These typical environments present large differences in the concentrations of total DOM and in colored DOM (CDOM). For the experiments, after filtration on 0,2 μm, samples were exposed during one day to the natural sunlight, then inoculated with the unexposed to light bacterial community of the same origin. The phototransformations of DOM lead to an increase of BP in the most eutrophic lagoon and to a decrease of in the mesotrophic one. These modifications of activity are associated with an increase of 120 % of the BGE in the coastal environment, and a decrease of 20-40 % in the lagoons. We also observed that the assimilation of DOM after sunlight exposure lead to modification in the structure of the total and active bacterial communities.The direct effects of the solar radiation on a natural assemblage lead to an increase of BP and BR in the column of water (from the surface until 10 m of depth) for various stations in the Mediterranean Sea. The inhibition of BP is essentially bound to UVR, and more important when the phytoplankton was eliminated from the sample, underlining the role of the phytoplanktonic excretions in the bacterial response to the UVR stress. Our results showed bacterial resilience induced by an increase of production during the night following the light exposure. The BR seems more durably affected by the solar radiation compared to BP. Generally, the solar radiation decreases the BCD and increases the BGE. The effects of the solar radiation seemed very limited in depth for the studied coastal stations, whereas the effects on BP seem measurable until depths of 8 m. These effects contrasted in the column of water were directly bound to the diffuse attenuation coefficient for downwelling UV irradiance of these various stations.To complete these data obtained in natural environment, physiological and morphological modifications of the bacterial strain Vibrio angustum were studied during growth under 4 light conditions (VIS+UVR-A+UVR-B, VIS+UVR-A, and darkness) by using a solar simulator in the laboratory. Our results suggest that the growth is severely inhibited by UVR-B and of a way moderated by UVR-A. The cells exposed to UVR-B present an important filamentation (size of cell: 42 μm with regard to the witness of size ~ 1,7 μm), with a reduced accumulation of damages DNA, and an absence of modifications in the composition in fatty acids, yet. These cells were able to recover a regular size after a darkness phase. The cells exposed to VIS and VIS UVR-A presented an important change of the fluorescence very likey in relation to the DNA modification of the topology of the genome.

Réponse des bactéries marines au rayonnement ultraviolet-visible et aux modifications photochimiques de la matière organique dissoute

Réponse des bactéries marines au rayonnement ultraviolet-visible et aux modifications photochimiques de la matière organique dissoute PDF Author: Maher Abboudi
Publisher:
ISBN:
Category :
Languages : en
Pages : 168

Book Description
In the marine environment, solar radiation can directly affect the activity of heterotrophic bacteria by causing various cellular damages or indirectly by modifying photochemically the dissolved organic matter (DOM). These various aspects were studied by determining experimentally the contribution of ultraviolet-B (UVR-B: 280-315 nm), ultraviolet-A (UVR-A: 315-400 nm) radiations as well as visible light (VIS: 400-700 nm) on DOM consumption by natural assemblages in various environments in the Northwestern Mediterranean Sea and by the marine bacterium, Vibrio angustum . We studied the effects of the photochemical transformations of DOM on the bacterial activity including production (BP), respiration (BR), bacterial growth efficiency (BGE) as well as the bacterial diversity, in two lagoons (Leucate and Canet) and in a coastal environment (Bay of Banyuls) in the Northwesternern Mediterranean Sea. These typical environments present large differences in the concentrations of total DOM and in colored DOM (CDOM). For the experiments, after filtration on 0,2 μm, samples were exposed during one day to the natural sunlight, then inoculated with the unexposed to light bacterial community of the same origin. The phototransformations of DOM lead to an increase of BP in the most eutrophic lagoon and to a decrease of in the mesotrophic one. These modifications of activity are associated with an increase of 120 % of the BGE in the coastal environment, and a decrease of 20-40 % in the lagoons. We also observed that the assimilation of DOM after sunlight exposure lead to modification in the structure of the total and active bacterial communities.The direct effects of the solar radiation on a natural assemblage lead to an increase of BP and BR in the column of water (from the surface until 10 m of depth) for various stations in the Mediterranean Sea. The inhibition of BP is essentially bound to UVR, and more important when the phytoplankton was eliminated from the sample, underlining the role of the phytoplanktonic excretions in the bacterial response to the UVR stress. Our results showed bacterial resilience induced by an increase of production during the night following the light exposure. The BR seems more durably affected by the solar radiation compared to BP. Generally, the solar radiation decreases the BCD and increases the BGE. The effects of the solar radiation seemed very limited in depth for the studied coastal stations, whereas the effects on BP seem measurable until depths of 8 m. These effects contrasted in the column of water were directly bound to the diffuse attenuation coefficient for downwelling UV irradiance of these various stations.To complete these data obtained in natural environment, physiological and morphological modifications of the bacterial strain Vibrio angustum were studied during growth under 4 light conditions (VIS+UVR-A+UVR-B, VIS+UVR-A, and darkness) by using a solar simulator in the laboratory. Our results suggest that the growth is severely inhibited by UVR-B and of a way moderated by UVR-A. The cells exposed to UVR-B present an important filamentation (size of cell: 42 μm with regard to the witness of size ~ 1,7 μm), with a reduced accumulation of damages DNA, and an absence of modifications in the composition in fatty acids, yet. These cells were able to recover a regular size after a darkness phase. The cells exposed to VIS and VIS UVR-A presented an important change of the fluorescence very likey in relation to the DNA modification of the topology of the genome.

Physiological and Molecular Responses of the Marine Oligotrophic Ultramicrobacterium Sphingopyxis Alaskensis RB2256 to Visible Light and Ultraviolet Radiation

Physiological and Molecular Responses of the Marine Oligotrophic Ultramicrobacterium Sphingopyxis Alaskensis RB2256 to Visible Light and Ultraviolet Radiation PDF Author: Sabine Matallana Surget
Publisher:
ISBN:
Category :
Languages : en
Pages : 450

Book Description
Les rayonnements ultraviolets (UVR) pénétrent en profondeur dans les eaux claires oligotrophes affectant une large part de la couche euphotique. Les bactérie hétérotrophes marines jouent un rôle fondamental dans la reminéralisation de la matière organique dissoute et sont spécialement sensibles aux UVR à la surface des océans. Dans un contexte de changement climatique et réduction de la couche d'ozone, il est fondamental de mieux comprendre la physiologie et la réponse de bactéries marines abondantes, exposées aux UVR. Nous avons choisi comme modèle d'étude, la bactérie Sphingopyxis alaskensis, numériquement abondante dans les eaux oligotrophes et précédemment décrite comme photorésistante. Nous avons démontré que les dommages ADN sont fortement modulés par le GC%, la température de croissance et temps passé en phase stationnaire. Les modifications du protéome ont été également analysées par technique iTRAQ et des processus cellulaires originaux ont été caractérisés en réponse aux UVR.

Modifications Métaboliques Et Structurelles Des Communautés de Bactéries Marines Exposées À Différentes Qualités de Matière Organique

Modifications Métaboliques Et Structurelles Des Communautés de Bactéries Marines Exposées À Différentes Qualités de Matière Organique PDF Author: Marine Blanchet
Publisher:
ISBN:
Category :
Languages : en
Pages : 0

Book Description
Heterotrophic bacterial communities in marine environment are exposed to a heterogeneous mixture of dissolved organic compounds with different bioavailability that may control both their activities and their composition. In the frame of this thesis, we studied the response of different coastal bacterial communities to the single or combined addition of various natural dissolved organic matter (DOM) photo-oxidized or not, presenting different bioavailability characteristics. Firstly, we studied the effects of the addition of highly bioreactive DOM derived from jellyfish on bacterial activities and community structure in a Mediterranean coastal lagoon. We observed that resilience of the bacterial community after the addition of DOM from the jellyfish was higher for metabolic functions than diversity, suggesting that jellyfish blooms can induce durable changes in the bacterial community structure in coastal lagoons. Secondly, we investigated the occurrence of priming effect (increase in microbial degradation of refractory DOM upon the addition of labile DOM) on coastal marine environments. Experiments with single or combined additions of recalcitrant and labile DOM sources were performed with a Mediterranean and a Patagonian fjord bacterial communities. In both cases we observed a greater effect of combined addition on bacterial community composition. However we did not observe an increase in recalcitrant DOM degradation of recalcitrant DOM following the addition of labile compounds, suggesting that priming effect did not occur during our experiments. Finally, we studied the impact of contrasted DOM (i.e. recalcitrant riverine DOM, labile phytoplankton-derived DOM) photodegradation on coastal bacterial communities activity and composition. We observed that photodegradation of phytoplankton-derived DOM led to a lower bacterial growth and changes in bacterial community diversity, in favour of Alphaproteobacteria.

Impact du rayonnement ultraviolet sur la phototransformation de la matière organique dissoute en milieu marin

Impact du rayonnement ultraviolet sur la phototransformation de la matière organique dissoute en milieu marin PDF Author: Marc Tedetti
Publisher:
ISBN:
Category :
Languages : en
Pages : 193

Book Description


Influence de la matière organique dissoute naturelle et d'herbicides, seuls et combinés, sur des microalgues marines et d'eau douce

Influence de la matière organique dissoute naturelle et d'herbicides, seuls et combinés, sur des microalgues marines et d'eau douce PDF Author: Nathalie Coquillé
Publisher:
ISBN:
Category :
Languages : fr
Pages : 0

Book Description
Les microalgues, qui sont à la base des réseaux trophiques aquatiques, peuvent être la cibleindirecte des herbicides provenant des usages agricoles et urbains. Elles sont également en interaction avecd'autres éléments de leur environnement comme la matière organique dissoute (MOD) naturelle, ellemêmesusceptible d'interagir avec les herbicides. Cette thèse a visé à étudier, en milieu contrôlé, l'influencede la MOD naturelle sur la toxicité d'herbicides vis-à-vis de microalgues en cultures monospécifiques nonaxéniques. Ont été considérés de la MOD naturelle d'eau douce et marine, trois herbicides (irgarol, diuronet S-métolachlore) seuls et en mélange, deux espèces de microalgues dulçaquicoles (Gomphonema gracileet Sphaerellopsis sp.) et deux espèces marines (Chaetoceros calcitrans et Tetraselmis suecica). Les effetsont été déterminés sur la croissance, l'efficacité photosynthétique et le contenu relatif en lipides desmicroalgues. En parallèle, l'environnement chimique a été caractérisé en suivant l'évolution de lacomposition et des propriétés de la MOD, ainsi que des concentrations d'herbicides et de leurs métabolites.Les résultats de ces travaux, qui considèrent pour la première fois la MOD naturelle dans sa globalité eninteraction avec des microalgues et des herbicides, démontrent le rôle clé joué par la MOD sur (i) lastimulation de la croissance des quatre espèces de microalgues (et en retour la modification de la MOD parcelles-ci), (ii) la modulation de la toxicité des herbicides et suggèrent (iii) la capacité de Sphaerellopsis sp.et/ou de ses bactéries associées de biodégrader le diuron.

Décomposition de la matière organique et flux de carbone à travers le compartiment bactérien en milieu marin

Décomposition de la matière organique et flux de carbone à travers le compartiment bactérien en milieu marin PDF Author: Séri Clément Yoro
Publisher:
ISBN:
Category :
Languages : fr
Pages : 196

Book Description
CETTE ETUDE A POUR OBJECTIF PRINCIPAL DE QUANTIFIER ET DE MIEUX COMPRENDRE LES PROCESSUS MICROBIENS DE DEGRADATION ET DE REMINERALISATION DE LA MATIERE ORGANIQUE EN ETUDIANT, D'UNE PART, LES CONCENTRATIONS ET LES STOCKS DE CARBONE ORGANIQUE DISSOUS (COD), ET D'AUTRE PART, EN PRECISANT LES CONSTANTES DE DECOMPOSITION DU COD, AINSI QUE LES RENDEMENTS DE CROISSANCE DES BACTERIES SUR CE POOL DE MATIERE. LES RESULTATS OBTENUS INDIQUENT QUE LES CONCENTRATIONS DE COD SONT PLUS ELEVEES EN MEDITERRANEE NORD-OCCIDENTALE (65-118 M C) QUE DANS L'OCEAN AUSTRAL (31-60 M C). LE COUPLAGE ENTRE LES PROCESSUS AUTOTROPHES ET HETEROTROPHES, REPRESENTE PAR LE POURCENTAGE DE LA DEMANDE EN CARBONE DES BACTERIES PAR RAPPORT A LA PRODUCTION PRIMAIRE EST PLUS ELEVE EN MEDITERRANEE NORD-OCCIDENTALE (50-123%) QUE DANS L'OCEAN AUSTRAL (14-47%). LES EXPERIENCES DE BIODEGRADATION ONT MIS EN EVIDENCE LE ROLE DES BACTERIES DANS LA DECOMPOSITION ET LE TRANSFERT DE LA MATIERE ORGANIQUE DE L'ETAT PARTICULAIRE VERS L'ETAT REELLEMENT DISSOUS VIA LA PHASE COLLOIDALE. LES GROSSES PARTICULES (> 60 M) ET LES PARTICULES DES PIEGES DERIVANTS PRELEVEES EN MEDITERRANEE NORD-OCCIDENTALE SONT PLUS RAPIDEMENT DEGRADEES ET REMINERALISEES (0,25-0,61 J##1) PAR LES BACTERIES QUE CELLES PRELEVEES DANS L'OCEAN AUSTRAL (0,005-0,12 J##1), LES RENDEMENTS DE CROISSANCE DES BACTERIES DANS CES SITES ETANT PRATIQUEMENT SIMILAIRES (12-18%). LA SEPARATION DE LA MATIERE ORGANIQUE DISSOUTE (MOD) EN DEUX CLASSES DE TAILLE PAR ULTRAFILTRATION TANGENTIELLE A L'AIDE D'UNE MEMBRANE EN POLYSULFONE DE POROSITE 1000 DALTONS ( 1 NM), NOUS A PERMIS D'ETUDIER LA REACTIVITE DES FRACTIONS COLLOIDALES (> 1000 DA) ET REELLEMENT DISSOUTES (

Nitrogen Cycling in Coastal Marine Environments

Nitrogen Cycling in Coastal Marine Environments PDF Author: T. Henry Blackburn
Publisher:
ISBN:
Category : Science
Languages : en
Pages : 488

Book Description
Nitrogen discharge to the coastal environment has been increasing, posing the threat of accelerated eutrofication. Considerable research has been conducted in recent years to examine the impact of the nitrogen loading in coastal ecosystems. Based on proceedings from a SCOPE symposium held at the University of Aarhus in July of 1985, this volume covers a variety of up-to-date developments in research on nitrogen cycling in coastal marine environments. Topics include the role of nitrogen in algal productivity, regeneration of nutrients in the water column and the sediments, and the flow of nitrogen in coastal ecosystems.