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Novel 1H MR Probes to Interrogate the Tumor Microenvironment

Novel 1H MR Probes to Interrogate the Tumor Microenvironment PDF Author: Praveen Kumar Gulaka
Publisher:
ISBN:
Category : Magnetic resonance imaging
Languages : en
Pages :

Book Description
The term "tumor microenvironment" usually refers to the description of the physiological and metabolic conditions within solid tumors (primary or metastatic), and is significantly different from that of normal tissues. Assessment of factors like pH, tissue oxygen tension (pO2) and gene expression in the tumor microenvironment and the ability to image them in vivo can provide useful prognostic information. For example, hypoxia (low pO2), typically distributed heterogeneously in solid tumors, is known to affect both radiation sensitivity and the development of metastases thereby influencing the response to treatment. This dissertation research focuses on the evaluation of novel probes to interrogate the tumor microenvironment using proton (1H) magnetic resonance imaging (MRI), specifically hypoxia and gene expression. For the assessment of hypoxia, hexamethyldisiloxane (HMDSO) has been reported as a 1H MR based pO2 reporter molecule by in vivo spectroscopy and imaging using Proton Imaging of Siloxanes to Map Tissue Oxygenation Levels (PISTOL) technique. In further improvement of the technique, I evaluated HMDSO based nanoemulsions and various other siloxanes as quantitative 1H MR pO2 reporter molecules (Chapter 2). These reporter molecules exhibited a linear dependence of the spin lattice relaxation rate (R1) on pO2. HMDSO based nanoemulsions were further used in an in vivo feasibility study showing dynamic changes in rat thigh tissue oxygenation following an intramuscular injection in response to hyperoxic gas (normobaric and hyperbaric oxygen) breathing, thus showing the feasibility for use of these nanoemulsions as pO2 nanoprobes for systemic delivery. Another strategy for hypoxia imaging has been the use of 2-nitroimidazole based agents which selectively accumulated in hypoxic regions. In this dissertation, I report the in vitro and in vivo evaluation of GdDOTA monoamide conjugate of 2-nitroimidazole, GdDO3NI, as a novel hypoxia targeting MRI T1 contrast agent (Chapter 3). A higher uptake of GdDO3NI was observed in cells incubated under hypoxic conditions as well as hypoxic regions of Dunning R3327 AT1 prostate tumors. The MR observations were validated through inductively coupled plasma mass spectroscopic analysis. Further, I demonstrated the ability of GdDO3NI in monitoring the effect of hyperoxic (100% oxygen) gas breathing on modifying hypoxia in AT1 and HI tumors. Thus, GdDO3NI shows promise as a hypoxia targeting small molecular contrast agent, enabling the assessment of hypoxia at very high spatial resolution. For the assessment of gene expression, development of noninvasive imaging based reporter molecules has been an active area of study. In this dissertation, I evaluated a novel platform with enhanced T1 and T2 relaxation properties, for detecting ß-gal activity in lacZ transfected cells using novel analogs of the product of cleavage of commercially available substrate S-Ga ̐(Chapter 4). The synthesized mono and di- galactopyranosides (MGD and GD respectively) showed differential relaxation enhancements in vitro and the molecule C3-GD was identified as the optimal candidate for in vivo studies. Following intra-tumoral injection of C3-GD and ferric ammonium citrate solution in the lacZ transfected tumors, a pronounced shortening of T1 & T2 values was observed when compared to baseline, and persisted over 2 hours. This is attributed to the formation of an iron complex following chelation of aglycones produced by ß- gal activity. Thus C3-GD shows great promise as a 1H MR gene reporter molecule.

Novel 1H MR Probes to Interrogate the Tumor Microenvironment

Novel 1H MR Probes to Interrogate the Tumor Microenvironment PDF Author: Praveen Kumar Gulaka
Publisher:
ISBN:
Category : Magnetic resonance imaging
Languages : en
Pages :

Book Description
The term "tumor microenvironment" usually refers to the description of the physiological and metabolic conditions within solid tumors (primary or metastatic), and is significantly different from that of normal tissues. Assessment of factors like pH, tissue oxygen tension (pO2) and gene expression in the tumor microenvironment and the ability to image them in vivo can provide useful prognostic information. For example, hypoxia (low pO2), typically distributed heterogeneously in solid tumors, is known to affect both radiation sensitivity and the development of metastases thereby influencing the response to treatment. This dissertation research focuses on the evaluation of novel probes to interrogate the tumor microenvironment using proton (1H) magnetic resonance imaging (MRI), specifically hypoxia and gene expression. For the assessment of hypoxia, hexamethyldisiloxane (HMDSO) has been reported as a 1H MR based pO2 reporter molecule by in vivo spectroscopy and imaging using Proton Imaging of Siloxanes to Map Tissue Oxygenation Levels (PISTOL) technique. In further improvement of the technique, I evaluated HMDSO based nanoemulsions and various other siloxanes as quantitative 1H MR pO2 reporter molecules (Chapter 2). These reporter molecules exhibited a linear dependence of the spin lattice relaxation rate (R1) on pO2. HMDSO based nanoemulsions were further used in an in vivo feasibility study showing dynamic changes in rat thigh tissue oxygenation following an intramuscular injection in response to hyperoxic gas (normobaric and hyperbaric oxygen) breathing, thus showing the feasibility for use of these nanoemulsions as pO2 nanoprobes for systemic delivery. Another strategy for hypoxia imaging has been the use of 2-nitroimidazole based agents which selectively accumulated in hypoxic regions. In this dissertation, I report the in vitro and in vivo evaluation of GdDOTA monoamide conjugate of 2-nitroimidazole, GdDO3NI, as a novel hypoxia targeting MRI T1 contrast agent (Chapter 3). A higher uptake of GdDO3NI was observed in cells incubated under hypoxic conditions as well as hypoxic regions of Dunning R3327 AT1 prostate tumors. The MR observations were validated through inductively coupled plasma mass spectroscopic analysis. Further, I demonstrated the ability of GdDO3NI in monitoring the effect of hyperoxic (100% oxygen) gas breathing on modifying hypoxia in AT1 and HI tumors. Thus, GdDO3NI shows promise as a hypoxia targeting small molecular contrast agent, enabling the assessment of hypoxia at very high spatial resolution. For the assessment of gene expression, development of noninvasive imaging based reporter molecules has been an active area of study. In this dissertation, I evaluated a novel platform with enhanced T1 and T2 relaxation properties, for detecting ß-gal activity in lacZ transfected cells using novel analogs of the product of cleavage of commercially available substrate S-Ga ̐(Chapter 4). The synthesized mono and di- galactopyranosides (MGD and GD respectively) showed differential relaxation enhancements in vitro and the molecule C3-GD was identified as the optimal candidate for in vivo studies. Following intra-tumoral injection of C3-GD and ferric ammonium citrate solution in the lacZ transfected tumors, a pronounced shortening of T1 & T2 values was observed when compared to baseline, and persisted over 2 hours. This is attributed to the formation of an iron complex following chelation of aglycones produced by ß- gal activity. Thus C3-GD shows great promise as a 1H MR gene reporter molecule.

Molecular Imaging in Oncology

Molecular Imaging in Oncology PDF Author: Otmar Schober
Publisher: Springer Nature
ISBN: 3030426181
Category : Medical
Languages : en
Pages : 911

Book Description
This book discusses the most significant recent advances in oncological molecular imaging, covering the full spectrum from basic and preclinical research to clinical practice. The content is divided into five sections, the first of which is devoted to standardized and emerging technologies and probe designs for different modalities, such as PET, SPECT, optical and optoacoustic imaging, ultrasound, CT, and MRI. The second section focuses on multiscale preclinical applications ranging from advanced microscopy and mass spectroscopy to whole-body imaging. In the third section, various clinical applications are presented, including image-guided surgery and the radiomic analysis of multiple imaging features. The final two sections are dedicated to the emerging, crucial role that molecular imaging can play in the planning and monitoring of external and internal radiotherapy, and to future challenges and prospects in multimodality imaging. Given its scope, the handbook will benefit all readers who are interested in the revolution in diagnostic and therapeutic oncology that is now being brought about by molecular imaging.

Tumor Microenvironment and Cellular Stress

Tumor Microenvironment and Cellular Stress PDF Author: Constantinos Koumenis
Publisher: Springer Science & Business Media
ISBN: 146145915X
Category : Medical
Languages : en
Pages : 293

Book Description
The collection of chapters in this proceeding volume reflects the latest research presented at the Aegean meeting on Tumor Microenvironment and Cellular Stress held in Crete in Fall of 2012. The book provides critical insight to how the tumor microenvironment affects tumor metabolism, cell stemness, cell viability, genomic instability and more. Additional topics include identifying common pathways that are potential candidates for therapeutic intervention, which will stimulate collaboration between groups that are more focused on elucidation of biochemical aspects of stress biology and groups that study the pathophysiological aspects of stress pathways or engaged in drug discovery.

Experimental Pulse NMR

Experimental Pulse NMR PDF Author: Eiichi Fukushima
Publisher: CRC Press
ISBN: 0429973497
Category : Science
Languages : en
Pages : 290

Book Description
This book is about pulse nuclear magnetic resonance (NMR), with its techniques, the information to be obtained, and practical advice on performing experiments. The emphasis is on the motivation and physical ideas underlying NMR experiments and the actual techniques, including the hardware used. The level is generally suitable for those to whom pulse NMR is a new technique, be they students in chemistry or physics on the one hand and research workers in biology, geology, or agriculture, on the other. The book can be used for a senior or first year graduate course where it could supplement the standard NMR texts.

Metastasis Research Protocols

Metastasis Research Protocols PDF Author: Susan A. Brooks
Publisher: Springer Science & Business Media
ISBN: 159259137X
Category : Medical
Languages : en
Pages : 310

Book Description
In Volume I, Analysis of Cells and Tissues, we presented a range of protocols aimed at mapping and analyzing the expression of various molecules of pot- tial interest in metastasis research and for examining their production at the genetic level. In this second volume of metastasis research protocols, we move to the level of living cells and tissues and present methodologies applicable to examining metastatic behavior in vitro and in whole animal models. The methods described in the first section of this volume concentrate on the separation of cell lines with high and low metastatic potential, including the genetic modification of cell lines. The assay systems to test defined aspects of the metastatic cascade are then described in Part II and include cell migration assays, assays for matrix degrading enzymes, basement membrane degrading assays, adhesion assays, and assays of angiogenesis. The role of the specific elements of the metastatic cascade assayed in each of these systems in turn must of course be put into perspective relative to their roles in entire living organisms.

Oxygen Transport to Tissue XXXIV

Oxygen Transport to Tissue XXXIV PDF Author: William J. Welch
Publisher: Springer Science & Business Media
ISBN: 1461449898
Category : Medical
Languages : en
Pages : 387

Book Description
From the 39th annual conference of the International Society on Oxygen Transport to Tissue (ISOTT), held in Washington, DC, USA in July 2011, this volume covers aspects of oxygen transport from air to the cells, organs and organisms; instrumentation and methods to sense oxygen and clinical evidence. Oxygen Transport to Tissue XXXIV includes contributions from scientists (physicists, biologists and chemists), engineers, clinicians and mathematicians.

Targeted Therapies in Cancer:

Targeted Therapies in Cancer: PDF Author: Francesco Colotta
Publisher: Springer Science & Business Media
ISBN: 0387738983
Category : Medical
Languages : en
Pages : 200

Book Description
Billions of dollars are spent every year on research into targeted therapies for cancer. That’s why it’s more than ever crucial for the thousands of scientists working in the field to keep right up to date with the cutting edge. This fascinating collection of material goes a long way to helping them do so, featuring as it does contributions to a crucial international meeting in Italy. The meeting provided a forum for scientists and clinicians working in cancer drug discovery and therapy to share their opinions and experiences. The text here offers readers an overview of diverse approaches, ranging from drug discovery to cellular therapy. Overall, the book addresses the key question of whether ultimately targeted therapy in cancer will be a myth or a reality.

Methodologies for Metabolomics

Methodologies for Metabolomics PDF Author: Norbert W. Lutz
Publisher: Cambridge University Press
ISBN: 0521765900
Category : Medical
Languages : en
Pages : 641

Book Description
Metabolomics, the global characterisation of the small molecule complement involved in metabolism, has evolved into a powerful suite of approaches for understanding the global physiological and pathological processes occurring in biological organisms. The diversity of metabolites, the wide range of metabolic pathways and their divergent biological contexts require a range of methodological strategies and techniques. Methodologies for Metabolomics provides a comprehensive description of the newest methodological approaches in metabolomic research. The most important technologies used to identify and quantify metabolites, including nuclear magnetic resonance and mass spectrometry, are highlighted. The integration of these techniques with classical biological methods is also addressed. Furthermore, the book presents statistical and chemometric methods for evaluation of the resultant data. The broad spectrum of topics includes a vast variety of organisms, samples and diseases, ranging from in vivo metabolomics in humans and animals to in vitro analysis of tissue samples, cultured cells and biofluids.

Targeted Molecular Imaging in Oncology

Targeted Molecular Imaging in Oncology PDF Author: E. Edmund Kim
Publisher: Springer Science & Business Media
ISBN: 1475735057
Category : Medical
Languages : en
Pages : 302

Book Description
This volume is unique in reporting on strategies for the application of molecular targeted imaging agents such as antibodies, peptides, receptors and contrast agents in the biologic grading of tumors, differential diagnosis of tumors, prediction of therapeutic response and monitoring tumor response to treatment. It also includes updated information on the imaging of tumor angiogenesis, hypoxia, apoptosis and gene delivery as well as expression in the understanding and utility of tumor molecular biology for better cancer management.

Biochemistry of Signal Transduction and Regulation

Biochemistry of Signal Transduction and Regulation PDF Author: Gerhard Krauss
Publisher: John Wiley & Sons
ISBN: 3527605762
Category : Science
Languages : de
Pages : 558

Book Description
This all-new edition of a classic text has been thoroughly revised to keep pace with the rapid progress in signal transduction research. With didactic skill and clarity the author relates the observed biological phenomena to the underlying biochemical processes. Directed to advanced students, teachers, and researchers in biochemistry and molecular biology, this book describes the molecular basis of signal transduction, regulated gene expression, the cell cycle, tumorigenesis and apoptosis. "Provides a comprehensive account of cell signaling and signal transduction and, where possible, explains these processes at the molecular level" (Angewandte Chemie) "The clear and didactic presentation makes it a textbook very useful for students and researchers not familiar with all aspects of cell regulation." (Biochemistry) "This book is actually two books: Regulation and Signal Transduction." (Drug Research)