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Association Mapping in Plants

Association Mapping in Plants PDF Author: Nnadozie C. Oraguzie
Publisher: Springer Science & Business Media
ISBN:
Category : Science
Languages : en
Pages : 304

Book Description
For the past decade, there has been success in using conventional map-based strategies in identification and cloning of quantitative trait loci (QTL) in model plant species including tomato and Arabidopsis. These quantitative traits are generally the products of many loci with varying degrees of effect upon the observed phenotypes. Recently, a new approach to genetic mapping has emerged called association mapping. This new technique takes into account the thousands of genes to evaluate for QTL effect and is a more efficient approach that does not require generation of segregating populations/large numbers of progeny. As it can utilize all of the historic recombination events in a diverse population of individuals it can generate higher resolution genetic maps and, is needed to complement current map based cloning methods. Association Mapping in Plants provides both basic and advanced understanding of association mapping and an awareness of population genomics tools to facilitate mapping and identification of the underlying causes of quantitative trait variation in plants. It acts as a useful review of the marker technology, the statistical methodology, and the progress to date. It also offers guides to the use of single nucleotide polymorphisms (SNPs) in association studies. This book will appeal to all those with an interest in plant genetics, plant breeding, and plant genomics. About the Editors: Dr. Nnadozie C. Oraguzie is a Senior Scientist in Genetics at the Horticulture and Food Research Institute of New Zealand Ltd (HortResearch). Dr. Erik H. A. Rikkerink is a Science Leader at HortResearch, New Zealand. Dr. Susan E. Gardiner is a Principal Scientist and leader of the Gene Mapping research team at HortResearch, New Zealand. Dr. H. Nihal De Silva/STRONG is a Senior Scientist of Biometrics at HortResearch, New Zealand.

Association Mapping in Plants

Association Mapping in Plants PDF Author: Nnadozie C. Oraguzie
Publisher: Springer Science & Business Media
ISBN:
Category : Science
Languages : en
Pages : 304

Book Description
For the past decade, there has been success in using conventional map-based strategies in identification and cloning of quantitative trait loci (QTL) in model plant species including tomato and Arabidopsis. These quantitative traits are generally the products of many loci with varying degrees of effect upon the observed phenotypes. Recently, a new approach to genetic mapping has emerged called association mapping. This new technique takes into account the thousands of genes to evaluate for QTL effect and is a more efficient approach that does not require generation of segregating populations/large numbers of progeny. As it can utilize all of the historic recombination events in a diverse population of individuals it can generate higher resolution genetic maps and, is needed to complement current map based cloning methods. Association Mapping in Plants provides both basic and advanced understanding of association mapping and an awareness of population genomics tools to facilitate mapping and identification of the underlying causes of quantitative trait variation in plants. It acts as a useful review of the marker technology, the statistical methodology, and the progress to date. It also offers guides to the use of single nucleotide polymorphisms (SNPs) in association studies. This book will appeal to all those with an interest in plant genetics, plant breeding, and plant genomics. About the Editors: Dr. Nnadozie C. Oraguzie is a Senior Scientist in Genetics at the Horticulture and Food Research Institute of New Zealand Ltd (HortResearch). Dr. Erik H. A. Rikkerink is a Science Leader at HortResearch, New Zealand. Dr. Susan E. Gardiner is a Principal Scientist and leader of the Gene Mapping research team at HortResearch, New Zealand. Dr. H. Nihal De Silva/STRONG is a Senior Scientist of Biometrics at HortResearch, New Zealand.

Long-Range Control of Gene Expression

Long-Range Control of Gene Expression PDF Author: Veronica van Heyningen
Publisher: Academic Press
ISBN: 0080877818
Category : Science
Languages : en
Pages : 415

Book Description
Long-Range Control of Gene Expression covers the current progress in understanding the mechanisms for genomic control of gene expression, which has grown considerably in the last few years as insight into genome organization and chromatin regulation has advanced. Discusses the evolution of cis-regulatory sequences in drosophila Includes information on genomic imprinting and imprinting defects in humans Includes a chapter on epigenetic gene regulation in cancer

Natural Inheritance

Natural Inheritance PDF Author: Francis Galton
Publisher:
ISBN:
Category : Heredity
Languages : en
Pages : 288

Book Description


Genetics and Genomics of Populus

Genetics and Genomics of Populus PDF Author: Stefan Jansson
Publisher: Springer
ISBN: 1441915419
Category : Science
Languages : en
Pages : 388

Book Description
Genetics and Genomics of Populus provides an indepth description of the genetic and genomic tools and approaches for Populus, examines the biology that has been elucidated using genomics, and looks to the future of this unique model plant. This volume is designed to serve both experienced Populus researchers and newcomers to the field. Contributors to the volume are a blend of researchers, some who have spent most of their research career on Populus and others that have moved to Populus from other model systems. Research on Populus forms a useful complement to research on Arabidopsis. In fact, many plant species found in nature are – in terms of the life history and genetics – more similar to Populus than to Arabidopsis. Thus, the genetic and genomic strategies and tools developed by the Populus community, and showcased in this volume, will hopefully provide inspiration for researchers working in other, less well developed, systems.

Genetic Data Analysis for Plant and Animal Breeding

Genetic Data Analysis for Plant and Animal Breeding PDF Author: Fikret Isik
Publisher: Springer
ISBN: 3319551779
Category : Science
Languages : en
Pages : 409

Book Description
This book fills the gap between textbooks of quantitative genetic theory, and software manuals that provide details on analytical methods but little context or perspective on which methods may be most appropriate for a particular application. Accordingly this book is composed of two sections. The first section (Chapters 1 to 8) covers topics of classical phenotypic data analysis for prediction of breeding values in animal and plant breeding programs. In the second section (Chapters 9 to 13) we provide the concept and overall review of available tools for using DNA markers for predictions of genetic merits in breeding populations. With advances in DNA sequencing technologies, genomic data, especially single nucleotide polymorphism (SNP) markers, have become available for animal and plant breeding programs in recent years. Analysis of DNA markers for prediction of genetic merit is a relatively new and active research area. The algorithms and software to implement these algorithms are changing rapidly. This section represents state-of-the-art knowledge on the tools and technologies available for genetic analysis of plants and animals. However, readers should be aware that the methods or statistical packages covered here may not be available or they might be out of date in a few years. Ultimately the book is intended for professional breeders interested in utilizing these tools and approaches in their breeding programs. Lastly, we anticipate the usage of this volume for advanced level graduate courses in agricultural and breeding courses.

Ecological Genomics

Ecological Genomics PDF Author: Christian R. Landry
Publisher: Springer Science & Business Media
ISBN: 9400773471
Category : Science
Languages : en
Pages : 358

Book Description
Researchers in the field of ecological genomics aim to determine how a genome or a population of genomes interacts with its environment across ecological and evolutionary timescales. Ecological genomics is trans-disciplinary by nature. Ecologists have turned to genomics to be able to elucidate the mechanistic bases of the biodiversity their research tries to understand. Genomicists have turned to ecology in order to better explain the functional cellular and molecular variation they observed in their model organisms. We provide an advanced-level book that covers this recent research and proposes future development for this field. A synthesis of the field of ecological genomics emerges from this volume. Ecological Genomics covers a wide array of organisms (microbes, plants and animals) in order to be able to identify central concepts that motivate and derive from recent investigations in different branches of the tree of life. Ecological Genomics covers 3 fields of research that have most benefited from the recent technological and conceptual developments in the field of ecological genomics: the study of life-history evolution and its impact of genome architectures; the study of the genomic bases of phenotypic plasticity and the study of the genomic bases of adaptation and speciation.

Plant Breeding: Past, Present and Future

Plant Breeding: Past, Present and Future PDF Author: John E. Bradshaw
Publisher: Springer
ISBN: 3319232851
Category : Science
Languages : en
Pages : 710

Book Description
This book aims to help plant breeders by reviewing past achievements, currently successful practices, and emerging methods and techniques. Theoretical considerations are also presented to strike the right balance between being as simple as possible but as complex as necessary. The United Nations predicts that the global human population will continue rising to 9.0 billion by 2050. World food production will need to increase between 70-100 per cent in just 40 years. First generation bio-fuels are also using crops and cropland to produce energy rather than food. In addition, land area used for agriculture may remain static or even decrease as a result of degradation and climate change, despite more land being theoretically available, unless crops can be bred which tolerate associated abiotic stresses. Lastly, it is unlikely that steps can be taken to mitigate all of the climate change predicted to occur by 2050, and beyond, and hence adaptation of farming systems and crop production will be required to reduce predicted negative effects on yields that will occur without crop adaptation. Substantial progress will therefore be required in bridging the yield gap between what is currently achieved per unit of land and what should be possible in future, with the best farming methods and best storage and transportation of food, given the availability of suitably adapted cultivars, including adaptation to climate change. My book is divided into four parts: Part I is an historical introduction; Part II deals with the origin of genetic variation by mutation and recombination of DNA; Part III explains how the mating system of a crop species determines the genetic structure of its landraces; Part IV considers the three complementary options for future progress: use of sexual reproduction in further conventional breeding, base broadening and introgression; mutation breeding; and genetically modified crops.

Biology of Populus and Its Implications for Management and Conservation

Biology of Populus and Its Implications for Management and Conservation PDF Author: National Research Council Canada
Publisher: NRC Research Press
ISBN: 9780660165066
Category : Nature
Languages : en
Pages : 560

Book Description
"Poplar is increasingly recognized as an excellent model tree for the study of tree growth and its underlying physiology and genetics. By studying trees of the genus Populus (poplars, cottonwoods, aspens), which in their native ecosystems play a major role in the re-colonization of sites after disturbances, new insights have been gained into plantation culture and the development of improved cultivars. Of the 20 chapters in this publication, editored by an international group of researchers, one section deals with systematics, genetics, genetic manipulation and biotic interactions of Populus, while the other deals with stress response and the physiology of growth and productivity" --

Molecular Approaches in Natural Resource Conservation and Management

Molecular Approaches in Natural Resource Conservation and Management PDF Author: J. Andrew DeWoody
Publisher: Cambridge University Press
ISBN: 0521731348
Category : Nature
Languages : en
Pages : 401

Book Description
Intended for undergraduate and graduate students in conservation biology, natural resource management, and ecology, this book compiles compelling case histories in molecular ecology.

The Genetics and Breeding of Southern Pines

The Genetics and Breeding of Southern Pines PDF Author: Keith William Dorman
Publisher:
ISBN:
Category : Pine
Languages : en
Pages : 424

Book Description
A comprehensive compilation of genetic and breeding information from more than 1,000 sources on the 10 southern pine species. Major topics include species descriptions, factors of flowering and seed production, methods of vegetative propagation, traits of interspecific hybrids, and geographic, racial, stand, and tree-to-tree variation. Practical and detailed information is provided on various techniques and problems associated with creative breeding and seed production.