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Author: Rezaur Rahman Publisher: Apress ISBN: 1430259264 Category : Computers Languages : en Pages : 220
Book Description
Intel® Xeon Phi™ Coprocessor Architecture and Tools: The Guide for Application Developers provides developers a comprehensive introduction and in-depth look at the Intel Xeon Phi coprocessor architecture and the corresponding parallel data structure tools and algorithms used in the various technical computing applications for which it is suitable. It also examines the source code-level optimizations that can be performed to exploit the powerful features of the processor. Xeon Phi is at the heart of world’s fastest commercial supercomputer, which thanks to the massively parallel computing capabilities of Intel Xeon Phi processors coupled with Xeon Phi coprocessors attained 33.86 teraflops of benchmark performance in 2013. Extracting such stellar performance in real-world applications requires a sophisticated understanding of the complex interaction among hardware components, Xeon Phi cores, and the applications running on them. In this book, Rezaur Rahman, an Intel leader in the development of the Xeon Phi coprocessor and the optimization of its applications, presents and details all the features of Xeon Phi core design that are relevant to the practice of application developers, such as its vector units, hardware multithreading, cache hierarchy, and host-to-coprocessor communication channels. Building on this foundation, he shows developers how to solve real-world technical computing problems by selecting, deploying, and optimizing the available algorithms and data structure alternatives matching Xeon Phi’s hardware characteristics. From Rahman’s practical descriptions and extensive code examples, the reader will gain a working knowledge of the Xeon Phi vector instruction set and the Xeon Phi microarchitecture whereby cores execute 512-bit instruction streams in parallel. What you’ll learn How to calculate theoretical Gigaflops and bandwidth numbers on the hardware and measure them through code segment How to estimate latencies in fetching data from different cache hierarchies, including memory subsystems How to measure PCIe bus bandwidth between the host and coprocessor How to exploit power management and reliability features built into the hardware How to select and manipulate the best tools to tune particular Xeon Phi applications Algorithms and data structures for optimizing Xeon Phi performance Case studies of real-world Xeon Phi technical computing applications in molecular dynamics and financial simulations Who this book is for This book is for developers wishing to design and develop technical computing applications to achieve the highest performance available in the Intel Xeon Phi coprocessor hardware. It provides a solid base on the coprocessor architecture, as well as algorithm and data structure case studies for Xeon Phi coprocessor. The book may also be of interest to students and practitioners in computer engineering as a case study for massively parallel core microarchitecture of modern day processors. Table of Contents 1. Introduction to Xeon Phi Architecture 2. Programming Xeon Phi 3. Xeon Phi Vector Architecture and Instruction Set 4. Xeon Phi Core Microarchitecture 5. Xeon Phi Cache and Memory Subsystem 6. Xeon Phi PCIe Bus Data Transfer and Power Management 7. Xeon Phi System Software 8. Xeon Phi Application Development Tools 9. Xeon Phi Application Design and Implementation Considerations 10. Application Performance Tuning on Xeon Phi 11. Algorithms and Data Structures for Xeon Phi 12. Xeon Phi Application Development on Windows OS 13. OpenCL on Intel 14. Shared Memory Programming on Intel Xeon Phi
Author: Rezaur Rahman Publisher: Apress ISBN: 1430259264 Category : Computers Languages : en Pages : 220
Book Description
Intel® Xeon Phi™ Coprocessor Architecture and Tools: The Guide for Application Developers provides developers a comprehensive introduction and in-depth look at the Intel Xeon Phi coprocessor architecture and the corresponding parallel data structure tools and algorithms used in the various technical computing applications for which it is suitable. It also examines the source code-level optimizations that can be performed to exploit the powerful features of the processor. Xeon Phi is at the heart of world’s fastest commercial supercomputer, which thanks to the massively parallel computing capabilities of Intel Xeon Phi processors coupled with Xeon Phi coprocessors attained 33.86 teraflops of benchmark performance in 2013. Extracting such stellar performance in real-world applications requires a sophisticated understanding of the complex interaction among hardware components, Xeon Phi cores, and the applications running on them. In this book, Rezaur Rahman, an Intel leader in the development of the Xeon Phi coprocessor and the optimization of its applications, presents and details all the features of Xeon Phi core design that are relevant to the practice of application developers, such as its vector units, hardware multithreading, cache hierarchy, and host-to-coprocessor communication channels. Building on this foundation, he shows developers how to solve real-world technical computing problems by selecting, deploying, and optimizing the available algorithms and data structure alternatives matching Xeon Phi’s hardware characteristics. From Rahman’s practical descriptions and extensive code examples, the reader will gain a working knowledge of the Xeon Phi vector instruction set and the Xeon Phi microarchitecture whereby cores execute 512-bit instruction streams in parallel. What you’ll learn How to calculate theoretical Gigaflops and bandwidth numbers on the hardware and measure them through code segment How to estimate latencies in fetching data from different cache hierarchies, including memory subsystems How to measure PCIe bus bandwidth between the host and coprocessor How to exploit power management and reliability features built into the hardware How to select and manipulate the best tools to tune particular Xeon Phi applications Algorithms and data structures for optimizing Xeon Phi performance Case studies of real-world Xeon Phi technical computing applications in molecular dynamics and financial simulations Who this book is for This book is for developers wishing to design and develop technical computing applications to achieve the highest performance available in the Intel Xeon Phi coprocessor hardware. It provides a solid base on the coprocessor architecture, as well as algorithm and data structure case studies for Xeon Phi coprocessor. The book may also be of interest to students and practitioners in computer engineering as a case study for massively parallel core microarchitecture of modern day processors. Table of Contents 1. Introduction to Xeon Phi Architecture 2. Programming Xeon Phi 3. Xeon Phi Vector Architecture and Instruction Set 4. Xeon Phi Core Microarchitecture 5. Xeon Phi Cache and Memory Subsystem 6. Xeon Phi PCIe Bus Data Transfer and Power Management 7. Xeon Phi System Software 8. Xeon Phi Application Development Tools 9. Xeon Phi Application Design and Implementation Considerations 10. Application Performance Tuning on Xeon Phi 11. Algorithms and Data Structures for Xeon Phi 12. Xeon Phi Application Development on Windows OS 13. OpenCL on Intel 14. Shared Memory Programming on Intel Xeon Phi
Author: James Jeffers Publisher: Morgan Kaufmann ISBN: 0128091959 Category : Computers Languages : en Pages : 662
Book Description
This book is an all-in-one source of information for programming the Second-Generation Intel Xeon Phi product family also called Knights Landing. The authors provide detailed and timely Knights Landingspecific details, programming advice, and real-world examples. The authors distill their years of Xeon Phi programming experience coupled with insights from many expert customers — Intel Field Engineers, Application Engineers, and Technical Consulting Engineers — to create this authoritative book on the essentials of programming for Intel Xeon Phi products. Intel® Xeon PhiTM Processor High-Performance Programming is useful even before you ever program a system with an Intel Xeon Phi processor. To help ensure that your applications run at maximum efficiency, the authors emphasize key techniques for programming any modern parallel computing system whether based on Intel Xeon processors, Intel Xeon Phi processors, or other high-performance microprocessors. Applying these techniques will generally increase your program performance on any system and prepare you better for Intel Xeon Phi processors. A practical guide to the essentials for programming Intel Xeon Phi processors Definitive coverage of the Knights Landing architecture Presents best practices for portable, high-performance computing and a familiar and proven threads and vectors programming model Includes real world code examples that highlight usages of the unique aspects of this new highly parallel and high-performance computational product Covers use of MCDRAM, AVX-512, Intel® Omni-Path fabric, many-cores (up to 72), and many threads (4 per core) Covers software developer tools, libraries and programming models Covers using Knights Landing as a processor and a coprocessor
Author: James Jeffers Publisher: ISBN: Category : Industrial management Languages : en Pages : 432
Book Description
Authors Jim Jeffers and James Reinders spent two years helping educate customers about the prototype and pre-production hardware before Intel introduced the first Intel Xeon Phi coprocessor. They have distilled their own experiences coupled with insights from many expert customers, Intel Field Engineers, Application Engineers and Technical Consulting Engineers, to create this authoritative first book on the essentials of programming for this new architecture and these new products. This book is useful even before you ever touch a system with an Intel Xeon Phi coprocessor. To ensure that your applications run at maximum efficiency, the authors emphasize key techniques for programming any modern parallel computing system whether based on Intel Xeon processors, Intel Xeon Phi coprocessors, or other high performance microprocessors. Applying these techniques will generally increase your program performance on any system, and better prepare you for Intel Xeon Phi coprocessors and the Intel MIC architecture. A practical guide to the essentials of the Intel Xeon Phi coprocessor Presents best practices for portable, high-performance computing and a familiar and proven threaded, scalar-vector programming model Includes simple but informative code examples that explain the unique aspects of this new highly parallel and high performance computational product Covers wide vectors, many cores, many threads and high bandwidth cache/memory architecture.
Author: Xuan Shi Publisher: Springer Science & Business Media ISBN: 1461487455 Category : Computers Languages : en Pages : 244
Book Description
This book explores the impact of augmenting novel architectural designs with hardware‐based application accelerators. The text covers comprehensive aspects of the applications in Geographic Information Science, remote sensing and deploying Modern Accelerator Technologies (MAT) for geospatial simulations and spatiotemporal analytics. MAT in GIS applications, MAT in remotely sensed data processing and analysis, heterogeneous processors, many-core and highly multi-threaded processors and general purpose processors are also presented. This book includes case studies and closes with a chapter on future trends. Modern Accelerator Technologies for GIS is a reference book for practitioners and researchers working in geographical information systems and related fields. Advanced-level students in geography, computational science, computer science and engineering will also find this book useful.
Author: Endong Wang Publisher: Springer ISBN: 331906486X Category : Computers Languages : en Pages : 338
Book Description
The aim of this book is to explain to high-performance computing (HPC) developers how to utilize the Intel® Xeon PhiTM series products efficiently. To that end, it introduces some computing grammar, programming technology and optimization methods for using many-integrated-core (MIC) platforms and also offers tips and tricks for actual use, based on the authors’ first-hand optimization experience. The material is organized in three sections. The first section, “Basics of MIC”, introduces the fundamentals of MIC architecture and programming, including the specific Intel MIC programming environment. Next, the section on “Performance Optimization” explains general MIC optimization techniques, which are then illustrated step-by-step using the classical parallel programming example of matrix multiplication. Finally, “Project development” presents a set of practical and experience-driven methods for using parallel computing in application projects, including how to determine if a serial or parallel CPU program is suitable for MIC and how to transplant a program onto MIC. This book appeals to two main audiences: First, software developers for HPC applications – it will enable them to fully exploit the MIC architecture and thus achieve the extreme performance usually required in biological genetics, medical imaging, aerospace, meteorology and other areas of HPC. Second, students and researchers engaged in parallel and high-performance computing – it will guide them on how to push the limits of system performance for HPC applications.
Author: Christopher J. Hughes Publisher: Morgan & Claypool Publishers ISBN: 1627057641 Category : Computers Languages : en Pages : 123
Book Description
Having hit power limitations to even more aggressive out-of-order execution in processor cores, many architects in the past decade have turned to single-instruction-multiple-data (SIMD) execution to increase single-threaded performance. SIMD execution, or having a single instruction drive execution of an identical operation on multiple data items, was already well established as a technique to efficiently exploit data parallelism. Furthermore, support for it was already included in many commodity processors. However, in the past decade, SIMD execution has seen a dramatic increase in the set of applications using it, which has motivated big improvements in hardware support in mainstream microprocessors. The easiest way to provide a big performance boost to SIMD hardware is to make it wider— i.e., increase the number of data items hardware operates on simultaneously. Indeed, microprocessor vendors have done this. However, as we exploit more data parallelism in applications, certain challenges can negatively impact performance. In particular, conditional execution, noncontiguous memory accesses, and the presence of some dependences across data items are key roadblocks to achieving peak performance with SIMD execution. This book first describes data parallelism, and why it is so common in popular applications. We then describe SIMD execution, and explain where its performance and energy benefits come from compared to other techniques to exploit parallelism. Finally, we describe SIMD hardware support in current commodity microprocessors. This includes both expected design tradeoffs, as well as unexpected ones, as we work to overcome challenges encountered when trying to map real software to SIMD execution.
Author: Zhipeng Cai Publisher: Springer ISBN: 9783319595740 Category : Science Languages : en Pages : 0
Book Description
This book constitutes the proceedings of the 13th International Symposium on Bioinformatics Research and Applications, ISBRA 2017, held in Honolulu, HI, USA, in May/June 2017. The 27 full papers presented together with 18 short papers and 24 invited abstracts were carefully reviewed and selected from 131 submissions. They cover topics such as: biomarker discovery; biomedical databases and data integration; biomedical text mining and ortologies; biomolecular imaging; comparative genomics; computational genetic epidemiology; computational proteomics; data mining and visualization; gene expression analysis; genome analysis; high-performance bio-computing; metagenomics; molecular evolution; molecular modelling and simulation; next-generation sequencing data analysis; pattern discovery and classification; population genetics; software tools and applications; structural biology; and systems biology.
Author: Rezaur Rahman
Author: Rezaur Rahman
Author: James Jeffers
Author: James Jeffers
Author: Xuan Shi
Author: Endong Wang
Author: Christopher J. Hughes
Author: Stallings
Author: 
Author: Andrey Vladimirov
Author: Zhipeng Cai