Genomics of Soil- and Plant-Associated Fungi PDF Download
Are you looking for read ebook online? Search for your book and save it on your Kindle device, PC, phones or tablets. Download Genomics of Soil- and Plant-Associated Fungi PDF full book. Access full book title Genomics of Soil- and Plant-Associated Fungi by Benjamin A. Horwitz. Download full books in PDF and EPUB format.
Author: Benjamin A. Horwitz Publisher: Springer Science & Business Media ISBN: 364239339X Category : Science Languages : en Pages : 394
Book Description
This volume addresses the similarities and also the differences in the genomes of soil saprophytes, symbionts, and plant pathogens by using examples of fungal species to illustrate particular principles. It analyzes how the specific interactions with the hosts and the influence of the environment may have shaped genome evolution. The relevance of fungal genetic research and biotechnological applications is shown for areas such as plant pathogenesis, biomass degradation, litter decomposition, nitrogen assimilation, antibiotic production, mycoparasitism, energy, ecology, and also for soil fungi turning to human pathogens. In addition to the model organisms Neurospora and Aspergillus, the following species are covered providing a view of pathogens and mutualists: Trichoderma, Fusarium oxysporum, Cochliobolus heterostrophus, Penicillium chrysogenum, Rhizopus oryzae, Podospora anserina, and species belonging to Agaricomycetes, Archaeorhizomycetes and Magnaporthaceae. Ecology and potential applications have guided the choice of fungal genes to be studied and it will be fascinating to follow the trends of future sequencing projects.
Author: Benjamin A. Horwitz Publisher: Springer Science & Business Media ISBN: 364239339X Category : Science Languages : en Pages : 394
Book Description
This volume addresses the similarities and also the differences in the genomes of soil saprophytes, symbionts, and plant pathogens by using examples of fungal species to illustrate particular principles. It analyzes how the specific interactions with the hosts and the influence of the environment may have shaped genome evolution. The relevance of fungal genetic research and biotechnological applications is shown for areas such as plant pathogenesis, biomass degradation, litter decomposition, nitrogen assimilation, antibiotic production, mycoparasitism, energy, ecology, and also for soil fungi turning to human pathogens. In addition to the model organisms Neurospora and Aspergillus, the following species are covered providing a view of pathogens and mutualists: Trichoderma, Fusarium oxysporum, Cochliobolus heterostrophus, Penicillium chrysogenum, Rhizopus oryzae, Podospora anserina, and species belonging to Agaricomycetes, Archaeorhizomycetes and Magnaporthaceae. Ecology and potential applications have guided the choice of fungal genes to be studied and it will be fascinating to follow the trends of future sequencing projects.
Author: Ralph A. Dean Publisher: Springer ISBN: 3662440539 Category : Science Languages : en Pages : 206
Book Description
This book describes how genomics has revolutionized our understanding of agriculturally important plant-associated fungi. It illustrates some fundamental discoveries about these eukaryotic microbes with regard to the overall structure of their genomes, their lifestyles and the molecular mechanisms that form the basis of their interactions with plants. Genomics has provided new insights into fungal lifestyles and led to practical advances in plant breeding and crop protection, such as predictions about the spread and evolution of new pathogens. This volume focuses on fungi that are important cereal and other monocot plant pathogens and includes: Pyrenophora tritici-repentis, Cochliobolus sp., Colletotrichum sp., Fusarium graminearum, Mycosphaerella graminicola and Mycosphaerella fijiensis, Magnaporthe oryzae, Blumeria graminis and Puccinia graminis.
Author: Ralph A. Dean Publisher: Springer ISBN: 3662440563 Category : Science Languages : en Pages : 244
Book Description
This book describes how genomics has revolutionized our understanding of agriculturally important plant-associated fungi and oomycetes. It illustrates some fundamental discoveries about these eukaryotic microbes with regard to the overall structure of their genomes, their lifestyles and the molecular mechanisms that form the basis of their interactions with plants. Genomics has provided new insights into fungal lifestyles and led to practical advances in plant breeding and crop protection, such as predictions about the spread and evolution of new pathogens. This volume focuses on fungi and oomycetes that are typical dicot plant pathogens and includes: Sclerotinia sclerotiorum, Botrytis cinerea, Alternaria sp.,Verticillium alfalfae and Verticillium dahliae, Fusarium oxysporum, Phytophthora capsici, Phytophthora sojae, Phytophthora ramorum, Phytophthora infestans, Hyaloperonospora arabidopsidis.
Author: Magdalena Frąc Publisher: Frontiers Media SA ISBN: 2889459373 Category : Languages : en Pages : 140
Book Description
Fungi represent a large portion of the biodiversity on Earth and they are key players in soils where they provide numerous ecosystem functions. Soil fungi have pivotal ecological roles influencing plant health as symbionts, pathogens or decomposers. Soil fungal biodiversity is increasingly recognized as providing benefits to soil health as they facilitate if not control numerous ecosystem processes. Continued research on the identity, abundance and distribution of soil fungi, their various roles in context with the differentiation of the soil fungal community are thus fundamental to better understand the dimensions of fungal biodiversity, its impact on plant health as well as the prevention of fungal diseases. This Research Topic aims at collecting contributions that provide taxonomic, physiological and ecological characterizations of soil fungal communities that will aid in the understanding of their biology, their interrelationships as well as the mechanisms that underpin the various ecosystem functions they provide in the soil environment. This Research Topic focusing on environmental mycology encourages in particular to report sensitive, accurate and fast methods for the detection, identification and distribution of fungi, including metagenomics, metatranscriptomics and metabolomics approaches, as they increasingly reveal the impact of fungal biodiversity for soil and plant health.
Author: Rolf A. Prade Publisher: CRC Press ISBN: 9780203912249 Category : Science Languages : en Pages : 402
Book Description
This volume provides technical insight on how genomics-oriented studies may be used to bring new understanding to established models of fungal development. The book helps to assess and solve problems associated with multiple copies of genes and proteins with seemingly identical functions and depicts various industrial applications. To bridge the in
Author: Mysore V. Tejesvi Publisher: Frontiers Media SA ISBN: 2889452190 Category : Languages : en Pages : 159
Book Description
Plants are typically colonized by numerous endophyte species symbiotically without any noticeable disease symptoms. These microbes are abundant, diverse and play critical ecological roles across natural and agricultural ecosystems. Endophytes have attracted the attention of researchers due to their various beneficial effects on plants, especially in agricultural crop species. Genomic tools will enhance our understanding on the growth and nutrition requirements of this host-symbiont relationship. Recent advances in DNA sequencing technologies and bioinformatic pipelines have allowed analyzing the plant microbiome and host-endophyte interaction more effectively with limited bias. Furthermore, various studies have employed and utilized transcriptomic and genomic tools to understand the role of endophytes and their interaction with plant hosts. This electronic book covers various research articles highlighting the important developments on endophytes using transcriptomics, next generation sequencing and genomic tools.
Author: Chandra Shekhar Nautiyal Publisher: Springer Science & Business Media ISBN: 3540755756 Category : Science Languages : en Pages : 491
Book Description
Molecular Mechanisms of Plant and Microbe Coexistence presents studies on the complex and manifold interactions of plants and microbes at the population, genomics and proteomics level. The role of soil microbial diversity in enhancing plant health and plant microbe beneficial symbioses is discussed. Microbial communities are shown in the light of evolution. Main topics include genome coexistence and the functional genomics and proteomics of plant-associated microbes, which could form the basis for new environmentally benign strategies to combat infectious plant diseases and regulate plant growth. Further chapters focus on the role of signaling during the different stages of plant microbe coexistence, in symbiotic or pathogenic relationships, in quorum sensing and plant viral infections. Methods for studying the interactions in the root zone complement the book, which will certainly be of relevance in the practical application to agriculture, food security and for maintaining the balance of our ecosystems.
Author: Ajar Nath Yadav Publisher: Springer Nature ISBN: 3030484742 Category : Science Languages : en Pages : 381
Book Description
Microbes are ubiquitous in nature. Among microbes, fungal communities play an important role in agriculture, the environment, and medicine. Vast fungal diversity has been found in plant systems. The fungi associated with any plant system are in the form of epiphytic, endophytic, and rhizospheric fungi. These associated fungi play important roles in plant growth, crop yield, and soil health. The rhizospheric fungi present in rhizospheric zones have a sufficient amount of nutrients released by plant root systems in the form of root exudates for growth, development, and activities of microbes. Endophytic fungi enter in host plants mainly through wounds that naturally occur as a result of plant growth, or develop through root hairs and at epidermal conjunctions. The phyllospheric fungi may survive or proliferate on leaves, depending on the extent of influences of material in leaf diffuseness or exudates. The diverse group of fungal communities is a key component of soil-plant systems, where they are engaged in an intense network of interactions in the rhizospheric, endophytic, and phyllospheric areas, and they have emerged as an important and promising tool for sustainable agriculture. These fungal communities help to promote plant growth directly or indirectly by mechanisms for plant growth-promoting (PGP) attributes. These PGP fungi can be used as biofertilizers, bioinoculants, and biocontrol agents in place of chemical fertilizers and pesticides in an environmentally and eco-friendly manner. This book covers the current knowledge of plant-associated fungi and their potential biotechnological applications in agriculture and allied sectors. This book should be useful to scientists, researchers, and students of microbiology, biotechnology, agriculture, molecular biology, environmental biology, and related subjects.
Author: Dennis C. Gross Publisher: Springer ISBN: 3642553788 Category : Science Languages : en Pages : 283
Book Description
This book describes how genomics has revolutionized our scientific understanding of agriculturally important plant-associated bacteria. Each chapter focuses on the genomics of particular bacteria: the first described plant pathogen, Erwinia amylovora; phytoplasmas lacking cell walls; fastidious, phloem-restricted liberibacters; Pseudomonas syringae, which is a genetically tractable model system; Xanthomonas citri, which causes a disease that can devastate citrus crops and Pseudomonas fluorescens, which can protect plants from diseases. Topics considered in this volume include the importance of horizontal gene transfer in originating new bacterial strains and species and advances in transcriptomics that allow us to describe the complex regulatory networks critical to plant-microbe interactions. The availability of the Xanthomonas oryzae genome has led to new technologies in genome editing, which will revolutionize approaches to genetic engineering, even in eukaryotes. The contributions show how genomics has greatly accelerated progress toward understanding the biology of these bacteria and how that understanding can be translated into novel crop protection methods.
Author: Benjamin A. Horwitz
Author: Benjamin A. Horwitz
Author: Ralph A. Dean
Author: Ralph A. Dean
Author: Magdalena Frąc
Author: Rolf A. Prade
Author: Mysore V. Tejesvi
Author: Chandra Shekhar Nautiyal
Author: James T. Tambong
Author: Ajar Nath Yadav
Author: Dennis C. Gross