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Gene Regulatory Mechanisms in Development and Evolution: Insights from Echinoderms

Gene Regulatory Mechanisms in Development and Evolution: Insights from Echinoderms PDF Author:
Publisher: Academic Press
ISBN: 012817188X
Category : Science
Languages : en
Pages : 252

Book Description
Sea urchins and other echinoderms, which have been studied intensively by developmental biologists for more than a century, are currently among the most prominent models for elucidating the genomic regulatory processes that control embryogenesis and the evolution of those processes. This volume contains reviews from the world’s leading researchers who are using echinoderms to address these questions. Chapters focus on gene regulatory networks that drive the differentiation and morphogenesis of major embryonic tissues such as the skeleton, muscle, nervous system, immune system, pigment cells, and germ line, and on evolutionary insights from comparative studies of these networks across echinoderms and other taxa. Other chapters comprehensively review the architecture and evolution of the cell signaling pathways that establish the early embryonic axes and on recent evolutionary changes in gene networks that have led to dramatic changes in the life history modes of echinoderms. This volume provides a comprehensive, current picture of exciting research at the interface between developmental genomics and evolution from one of the research communities leading this work. Contributions from leading investigators who use echinoderms as model organisms Up-to-date reviews of developmental gene regulatory networks Current work at the interface between developmental genomics and evolution

Gene Regulatory Mechanisms in Development and Evolution: Insights from Echinoderms

Gene Regulatory Mechanisms in Development and Evolution: Insights from Echinoderms PDF Author:
Publisher: Academic Press
ISBN: 012817188X
Category : Science
Languages : en
Pages : 252

Book Description
Sea urchins and other echinoderms, which have been studied intensively by developmental biologists for more than a century, are currently among the most prominent models for elucidating the genomic regulatory processes that control embryogenesis and the evolution of those processes. This volume contains reviews from the world’s leading researchers who are using echinoderms to address these questions. Chapters focus on gene regulatory networks that drive the differentiation and morphogenesis of major embryonic tissues such as the skeleton, muscle, nervous system, immune system, pigment cells, and germ line, and on evolutionary insights from comparative studies of these networks across echinoderms and other taxa. Other chapters comprehensively review the architecture and evolution of the cell signaling pathways that establish the early embryonic axes and on recent evolutionary changes in gene networks that have led to dramatic changes in the life history modes of echinoderms. This volume provides a comprehensive, current picture of exciting research at the interface between developmental genomics and evolution from one of the research communities leading this work. Contributions from leading investigators who use echinoderms as model organisms Up-to-date reviews of developmental gene regulatory networks Current work at the interface between developmental genomics and evolution

Molecular Paleobiology of the Echinoderm Skeleton

Molecular Paleobiology of the Echinoderm Skeleton PDF Author: Jeffrey R. Thompson
Publisher: Cambridge University Press
ISBN: 1009189190
Category : Science
Languages : en
Pages : 120

Book Description
The echinoderms are an ideal group to understand evolution from a holistic, interdisciplinary framework. The genetic regulatory networks underpinning development in echinoderms are some of the best known for any model group. Additionally, the echinoderms have an excellent fossil record, elucidating in in detail the evolutionary changes underpinning morphological evolution. In this Element, the echinoderms are discussed as a model group for molecular palaeobiological studies, integrating what is known of their development, genomes, and fossil record. Together, these insights shed light on the molecular and morphological evolution underpinning the vast biodiversity of echinoderms, and the animal kingdom more generally.

Evolution of a Conserved Gene Regulatory Network Among Echinoderms

Evolution of a Conserved Gene Regulatory Network Among Echinoderms PDF Author: Mitch James Ruzek
Publisher:
ISBN:
Category :
Languages : en
Pages :

Book Description
ABSTRACT: One of the most fundamental and critical functions of embryological development is the control and regulation of differential genes and gene networks. The study of the gene networks involved in development is a mechanism for understanding the developmental process at its most basic level. An evolutionary change in a morphological feature or features must depend on a reorganization or co-option of one or more developmental gene regulatory network just as retention of an ancestral morphological trait must rely on retention of a common gene regulatory network. Studying two closely related classes in the same phylum with the same essential morphological feature yet with unique developmental characteristics provides insight into the evolution of these evolutionarily resolute gene regulatory networks. We have developed a new model system using brittle stars to further these studies. In this investigation I have identified key genes of the gene regulatory network (GRN) found in embryonic endo-mesoderm development in the sea urchin, responsible for embryonic skeletogenesis, and compared these key genes with homologues in the brittle star. From the examination of two closely related gene regulatory networks found in two related classes of Echinoderms insight can be gained into the foundation of morphological change over time.

Echinoderms Part B

Echinoderms Part B PDF Author:
Publisher: Academic Press
ISBN: 0128170735
Category : Science
Languages : en
Pages : 552

Book Description
Echinoderms, Volume 151, the latest release in the Methods in Cell Biology series, highlights advances in the field, with this update presenting chapters on Echinoderm Genome Databases, analysis of gene regulatory networks, using ATAC-seq and RNA-seq to increase resolution in GRN connectivity, multiplex cis-regulatory analysis, experimental approaches GRN/signal pathways, BACs, analysis of chromatin accessibility using ATAC-seq, analysis of sea urchin proteins /Click IT, CRISPR/Cas9-mediated genome editing in sea urchins, super-resolution and in toto imaging of echinoderm embryos, and methods for analysis of intracellular ion signals in sperm, eggs and embryos. Presents clear, concise protocols provided by experts who have established the echinoderms as a model systems Highlights new advances in the field, with this update presenting interesting chapters on echinoderms

Experimental and Computation Approaches Reveal Mechanisms of Evolution of Gene Regulatory Networks Underlying Echinoderm Skeletogenesis

Experimental and Computation Approaches Reveal Mechanisms of Evolution of Gene Regulatory Networks Underlying Echinoderm Skeletogenesis PDF Author: David Viktor Dylus
Publisher:
ISBN:
Category :
Languages : en
Pages : 0

Book Description


Experimental and Computation Approaches Reveal Mechanisms of Evolution of Gene Regulatory Networks Underlying Echinoderm Skeletogenesis

Experimental and Computation Approaches Reveal Mechanisms of Evolution of Gene Regulatory Networks Underlying Echinoderm Skeletogenesis PDF Author: D. V. Dylus
Publisher:
ISBN:
Category :
Languages : en
Pages :

Book Description


The Regulatory Genome

The Regulatory Genome PDF Author: Eric H. Davidson
Publisher: Elsevier
ISBN: 0080455573
Category : Science
Languages : en
Pages : 303

Book Description
Gene regulatory networks are the most complex, extensive control systems found in nature. The interaction between biology and evolution has been the subject of great interest in recent years. The author, Eric Davidson, has been instrumental in elucidating this relationship. He is a world renowned scientist and a major contributor to the field of developmental biology. The Regulatory Genome beautifully explains the control of animal development in terms of structure/function relations of inherited regulatory DNA sequence, and the emergent properties of the gene regulatory networks composed of these sequences. New insights into the mechanisms of body plan evolution are derived from considerations of the consequences of change in developmental gene regulatory networks. Examples of crucial evidence underscore each major concept. The clear writing style explains regulatory causality without requiring a sophisticated background in descriptive developmental biology. This unique text supersedes anything currently available in the market. The only book in the market that is solely devoted to the genomic regulatory code for animal development Written at a conceptual level, including many novel synthetic concepts that ultimately simplify understanding Presents a comprehensive treatment of molecular control elements that determine the function of genes Provides a comparative treatment of development, based on principles rather than description of developmental processes Considers the evolutionary processes in terms of the structural properties of gene regulatory networks Includes 42 full-color descriptive figures and diagrams

Echinoderm Larvae

Echinoderm Larvae PDF Author: Herbert Clifton Chadwick
Publisher:
ISBN:
Category : Echinodermata
Languages : en
Pages : 64

Book Description


Genomic Regulatory Systems

Genomic Regulatory Systems PDF Author: Eric H. Davidson
Publisher: Elsevier
ISBN: 0080525598
Category : Science
Languages : en
Pages : 274

Book Description
The interaction between biology and evolution has been the subject of great interest in recent years. Because evolution is such a highly debated topic, a biologically oriented discussion will appeal not only to scientists and biologists but also to the interested lay person. This topic will always be a subject of controversy and therefore any breaking information regarding it is of great interest.The author is a recognized expert in the field of developmental biology and has been instrumental in elucidating the relationship between biology and evolution. The study of evolution is of interest to many different kinds of people and Genomic Regulatory Systems: In Development and Evolution is written at a level that is very easy to read and understand even for the nonscientist. * Contents Include* Regulatory Hardwiring: A Brief Overview of the Genomic Control Apparatus and Its Causal Role in Development and Evolution * Inside the Cis-Regulatory Module: Control Logic and How the Regulatory Environment Is Transduced into Spatial Patterns of Gene Expression* Regulation of Direct Cell-Type Specification in Early Development* The Secret of the Bilaterians: Abstract Regulatory Design in Building Adult Body Parts* Changes That Make New Forms: Gene Regulatory Systems and the Evolution of Body Plans

The Sea Urchin Embryo

The Sea Urchin Embryo PDF Author: G. Czihak
Publisher: Springer Science & Business Media
ISBN: 3642659640
Category : Science
Languages : en
Pages : 719

Book Description
Sea urchin eggs are objects of wonder for the student who sees them for the first time under the microscope. The formation of the fertil ization membrane after insemination, the beauty of mitotic cleavage, the elegant swimming of embryos, remain an esthetic pleasure even for the eyes of seasoned investigators. But sea urchin eggs have other, more practical, advantages: they lend themselves to surgical operation without difficulty and they heal perfectly; they can be obtained in very large amounts and represent thus an extremely favorable material for biochemists and molecular embryologists. It is not surprising that, in view of these exceptional advantages, sea urchin eggs have attracted the interest of innumerable biologists since O. HERTWIG discovered the fusion of the pronuclei (amphimixy), in Paracentrotus lividus, almost a century ago. The purpose of the present book is to present, in a complete and orderly fashion, the enormous amount of information which has been gathered, in the course of a hun dred years of sea urchin embryology. JOSEPH NEEDHAM, in 1930, was still able to present all that was known, at that time, on the biochemistry of all possible species of developing eggs and embryos in his famous "Chemical Embryology" (Cambridge University Press) . It would no longer be possible for one man to write a modern version of what was a "Bible" for the young embryologists of forty years ago.