From Genes to Species: Novel Insights from Metagenomics

From Genes to Species: Novel Insights from Metagenomics PDF Author: Eamonn P. Culligan
Publisher: Frontiers Media SA
ISBN: 2889199754
Category : Microbiology
Languages : en
Pages : 231

Book Description
The majority of microbes in many environments are considered “as yet uncultured” and were traditionally considered inaccessible for study through the microbiological gold standard of pure culture. The emergence of metagenomic approaches has allowed researchers to access and study these microbes in a culture-independent manner through DNA sequencing and functional expression of metagenomic DNA in a heterologous host. Metagenomics has revealed an extraordinary degree of diversity and novelty, not only among microbial communities themselves, but also within the genomes of these microbes. This Research Topic aims to showcase the utility of metagenomics to gain insights on the microbial and genomic diversity in different environments by revealing the breadth of novelty that was in the past, largely untapped.

The New Science of Metagenomics

The New Science of Metagenomics PDF Author: National Research Council
Publisher: National Academies Press
ISBN: 0309106761
Category : Science
Languages : en
Pages : 170

Book Description
Although we can't usually see them, microbes are essential for every part of human life-indeed all life on Earth. The emerging field of metagenomics offers a new way of exploring the microbial world that will transform modern microbiology and lead to practical applications in medicine, agriculture, alternative energy, environmental remediation, and many others areas. Metagenomics allows researchers to look at the genomes of all of the microbes in an environment at once, providing a "meta" view of the whole microbial community and the complex interactions within it. It's a quantum leap beyond traditional research techniques that rely on studying-one at a time-the few microbes that can be grown in the laboratory. At the request of the National Science Foundation, five Institutes of the National Institutes of Health, and the Department of Energy, the National Research Council organized a committee to address the current state of metagenomics and identify obstacles current researchers are facing in order to determine how to best support the field and encourage its success. The New Science of Metagenomics recommends the establishment of a "Global Metagenomics Initiative" comprising a small number of large-scale metagenomics projects as well as many medium- and small-scale projects to advance the technology and develop the standard practices needed to advance the field. The report also addresses database needs, methodological challenges, and the importance of interdisciplinary collaboration in supporting this new field.

Environmental Genomics

Environmental Genomics PDF Author: C. Cristofre Martin
Publisher: Springer Science & Business Media
ISBN: 1588297772
Category : Science
Languages : en
Pages : 363

Book Description
Here is a manual for an environmental scientist who wishes to embrace genomics to answer environmental questions. The volume covers: gene expression profiling, whole genome and chromosome mutation detection, and methods to assay genome diversity and polymorphisms within a particular environment. This book provides a systematic framework for determining environmental impact and ensuring human health and the sustainability of natural populations.

Functional Metagenomics: Tools and Applications

Functional Metagenomics: Tools and Applications PDF Author: Trevor C. Charles
Publisher: Springer
ISBN: 3319615106
Category : Science
Languages : en
Pages : 256

Book Description
In this book, the latest tools available for functional metagenomics research are described.This research enables scientists to directly access the genomes from diverse microbial genomes at one time and study these “metagenomes”. Using the modern tools of genome sequencing and cloning, researchers have now been able to harness this astounding metagenomic diversity to understand and exploit the diverse functions of microorganisms. Leading scientists from around the world demonstrate how these approaches have been applied in many different settings, including aquatic and terrestrial habitats, microbiomes, and many more environments. This is a highly informative and carefully presented book, providing microbiologists with a summary of the latest functional metagenomics literature on all specific habitats.

Metagenomics

Metagenomics PDF Author: Wolfgang R. Streit
Publisher: Springer Nature
ISBN: 1071627953
Category : Science
Languages : en
Pages : 290

Book Description
This volume provides up-to-date and novel techniques for various screening technologies currently used in metagenomics and related areas. Starting with DNA/RNA isolation from environmental samples, the book continues by delving into areas such as current methods used to isolate DNA and construct metagenomic libraries, establishment of metagenome libraries in non-E. coli hosts, and topics like function-driven mining of metagenomic DNA, screening and analyzing protocols for a wide array of different genes encoding enzymes, bacterial viruses and much more. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step and readily reproducible protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Metagenomics: Methods and Protocols, Third Edition provides a comprehensive collection of up-to-date metagenome protocols and tools for the recovery of many major types of biocatalysts and allows for the easy setup of these screens in microbiology laboratories.

Metagenomics: Techniques, Applications, Challenges and Opportunities

Metagenomics: Techniques, Applications, Challenges and Opportunities PDF Author: Reena Singh Chopra
Publisher: Springer Nature
ISBN: 9811565295
Category : Science
Languages : en
Pages : 225

Book Description
This book summarizes the various areas of research in metagenomics and their potential applications in medicine, the environment and biotechnology. The book presents the recent advances in theoretical, methodological and applied aspects of metagenomics and highlights their applications in the fields of environmental microbial forensics, bioremediation, drug-discovery and agriculture. In addition, the book discusses various metagenomics approaches used for understanding the microbial physiology and biochemistry. Lastly the book describes a range of bioinformatics tools and computational methods for metagenomics analysis as well as the functional diversity and dynamics of microbial communities colonizing the human skin.

Novel Insights Into the Responses of the Plant Microbiome to Abiotic Factors

Novel Insights Into the Responses of the Plant Microbiome to Abiotic Factors PDF Author: Collin M. Timm
Publisher: Frontiers Media SA
ISBN: 2889710920
Category : Science
Languages : en
Pages : 130

Book Description


Multi-Omics Analysis of the Human Microbiome

Multi-Omics Analysis of the Human Microbiome PDF Author: Indra Mani
Publisher: Springer Nature
ISBN: 9819718449
Category :
Languages : en
Pages : 357

Book Description


Molecular Genetics and Genomics Tools in Biodiversity Conservation

Molecular Genetics and Genomics Tools in Biodiversity Conservation PDF Author: Ashwani Kumar
Publisher: Springer Nature
ISBN: 9811660050
Category : Science
Languages : en
Pages : 334

Book Description
This book provides insight into the use of molecular and genomic techniques to the study of populations of critically important species at various geographical scales. It delves into a wide range of issues relevant to biodiversity conservation, such as population differentiation, landscape genomics, ecological interactions, phylogenetics, phylogeography, metagenomics, molecular methods, and data processing. The current rate of biodiversity loss is unprecedented and valuable genetic resources are being lost at an alarmingly rate. Effective strategies to conserve these genetic resources are essential to maintain healthy ecosystems with inter-dependent species. The book is an invaluable resource for training undergraduate and graduate students, postdoctoral fellows, and for young researchers. This book is particularly useful for the policy makers and academics who want to learn about important concepts in population and conservation genetics and genomics.

Soil Metagenomics

Soil Metagenomics PDF Author: T.C.K. Sugitha
Publisher: CRC Press
ISBN: 1000332616
Category : Science
Languages : en
Pages : 239

Book Description
This book focuses on the recent advents and technological breakthroughs in metagenomic approaches coupled with their applications in agriculture. The intended audience include soil and environmental microbiologists, molecular biologists and policy makers. The book expertly describes the latest fourth generation metagenomic technologies from sample collection to data analysis, metatranscriptomic, metaproteomic and metabolomics studies Note: T& F does not sell or distribute the Hardback in India, Pakistan, Nepal, Bhutan, Bangladesh and Sri Lanka.