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Author: S. Kevin Zhou Publisher: Academic Press ISBN: 0323858880 Category : Computers Languages : en Pages : 544
Book Description
Deep Learning for Medical Image Analysis, Second Edition is a great learning resource for academic and industry researchers and graduate students taking courses on machine learning and deep learning for computer vision and medical image computing and analysis. Deep learning provides exciting solutions for medical image analysis problems and is a key method for future applications. This book gives a clear understanding of the principles and methods of neural network and deep learning concepts, showing how the algorithms that integrate deep learning as a core component are applied to medical image detection, segmentation, registration, and computer-aided analysis. · Covers common research problems in medical image analysis and their challenges · Describes the latest deep learning methods and the theories behind approaches for medical image analysis · Teaches how algorithms are applied to a broad range of application areas including cardiac, neural and functional, colonoscopy, OCTA applications and model assessment · Includes a Foreword written by Nicholas Ayache
Author: S. Kevin Zhou Publisher: Academic Press ISBN: 0323858880 Category : Computers Languages : en Pages : 544
Book Description
Deep Learning for Medical Image Analysis, Second Edition is a great learning resource for academic and industry researchers and graduate students taking courses on machine learning and deep learning for computer vision and medical image computing and analysis. Deep learning provides exciting solutions for medical image analysis problems and is a key method for future applications. This book gives a clear understanding of the principles and methods of neural network and deep learning concepts, showing how the algorithms that integrate deep learning as a core component are applied to medical image detection, segmentation, registration, and computer-aided analysis. · Covers common research problems in medical image analysis and their challenges · Describes the latest deep learning methods and the theories behind approaches for medical image analysis · Teaches how algorithms are applied to a broad range of application areas including cardiac, neural and functional, colonoscopy, OCTA applications and model assessment · Includes a Foreword written by Nicholas Ayache
Author: Bharath Ramsundar Publisher: O'Reilly Media ISBN: 1492039802 Category : Science Languages : en Pages : 236
Book Description
Deep learning has already achieved remarkable results in many fields. Now it’s making waves throughout the sciences broadly and the life sciences in particular. This practical book teaches developers and scientists how to use deep learning for genomics, chemistry, biophysics, microscopy, medical analysis, and other fields. Ideal for practicing developers and scientists ready to apply their skills to scientific applications such as biology, genetics, and drug discovery, this book introduces several deep network primitives. You’ll follow a case study on the problem of designing new therapeutics that ties together physics, chemistry, biology, and medicine—an example that represents one of science’s greatest challenges. Learn the basics of performing machine learning on molecular data Understand why deep learning is a powerful tool for genetics and genomics Apply deep learning to understand biophysical systems Get a brief introduction to machine learning with DeepChem Use deep learning to analyze microscopic images Analyze medical scans using deep learning techniques Learn about variational autoencoders and generative adversarial networks Interpret what your model is doing and how it’s working
Author: Vahid Ebrahimi Publisher: ISBN: Category : Languages : en Pages : 0
Book Description
Fluorescence microscopy has been a valuable tool in the field of biological science as it allows one to study the structure and interaction of protein complexes and organelles in living cells. However, conventional optical microscopy technique has been limited by a trade-off between spatiotemporal resolution, signal contrast, and photodamage to the biological samples. It means that an increase in spatial resolution or signal contrast comes at the cost of higher laser power, serial-scanning, or longer image acquisition time. Unfortunately, this leads to severe photobleaching and photodamage to the samples and/or limited throughput of imaging, which is highly challenging to be circumvented through only optical imaging technique. Therefore, one has turned to artificial intelligence (AI) in image processing, applying deep learning algorithms to different imaging modalities to overcome these traditional limitations in optical microscopy systems. Herein we present multiple strategies on how deep learning can be applied to solve challenging and fundamental problems in different fluorescence microscopy modalities. To do so, we present UNet-RCAN, a two-step deep learning network architecture based on a residual U-Net and residual channel attention network (RCAN) for image restoration. We demonstrate that UNet-RCAN achieves higher prediction accuracy compared to other state-of-the-art deep learning algorithms while maintaining the resolution of an output image compared to ground-truth data acquired with optical microscopes. We applied our method to three fluorescence imaging modalities. Firstly, we successfully demonstrate that UNet-RCAN can achieve up to two orders of magnitude acceleration in stimulated emission depletion (STED) imaging while maintaining super-resolution. This significant acceleration enables mitigation of photobleaching and photodamage by robust restoration of noisy 2D and 3D STED images from multiple targets as well as live-cell STED imaging of inner-mitochondrial dynamics with a ten-fold increase in the number of acquired frames compared to conventional STED microscopy. Secondly, we apply our approach in restoring high-resolution widefield deconvolution images of living cells with low light intensity and low photodamage. We show that the accuracy of deconvolution can significantly improve after image restoration with deep learning. Lastly, we show the application of UNet-RCAN in the resolution enhancement of single-shot volumetric imaging with a low numerical aperture objective lens.
Author: Mei Chen Publisher: Academic Press ISBN: 0128149736 Category : Computers Languages : en Pages : 230
Book Description
Are you a computer scientist working on image analysis? Are you a biologist seeking tools to process the microscopy data from image-based experiments? Computer Vision for Microscopy Image Analysis provides a comprehensive and in-depth discussion of modern computer vision techniques, in particular deep learning, for microscopy image analysis that will advance your efforts. Progress in imaging techniques has enabled the acquisition of large volumes of microscopy data and made it possible to conduct large-scale, image-based experiments for biomedical discovery. The main challenge and bottleneck in such experiments is the conversion of "big visual data" into interpretable information. Visual analysis of large-scale microscopy data is a daunting task. Computer vision has the potential to automate this task. One key advantage is that computers perform analysis more reproducibly and less subjectively than human annotators. Moreover, high-throughput microscopy calls for effective and efficient techniques as there are not enough human resources to advance science by manual annotation. This book articulates the strong need for biologists and computer vision experts to collaborate to overcome the limits of human visual perception, and devotes a chapter each to the major steps in analyzing microscopy images, such as detection and segmentation, classification, tracking, and event detection. Discover how computer vision can automate and enhance the human assessment of microscopy images for discovery Grasp the state-of-the-art approaches, especially deep neural networks Learn where to obtain open-source datasets and software to jumpstart his or her own investigation
Author: Guorong Wu Publisher: Academic Press ISBN: 0128041145 Category : Computers Languages : en Pages : 514
Book Description
Machine Learning and Medical Imaging presents state-of- the-art machine learning methods in medical image analysis. It first summarizes cutting-edge machine learning algorithms in medical imaging, including not only classical probabilistic modeling and learning methods, but also recent breakthroughs in deep learning, sparse representation/coding, and big data hashing. In the second part leading research groups around the world present a wide spectrum of machine learning methods with application to different medical imaging modalities, clinical domains, and organs. The biomedical imaging modalities include ultrasound, magnetic resonance imaging (MRI), computed tomography (CT), histology, and microscopy images. The targeted organs span the lung, liver, brain, and prostate, while there is also a treatment of examining genetic associations. Machine Learning and Medical Imaging is an ideal reference for medical imaging researchers, industry scientists and engineers, advanced undergraduate and graduate students, and clinicians. Demonstrates the application of cutting-edge machine learning techniques to medical imaging problems Covers an array of medical imaging applications including computer assisted diagnosis, image guided radiation therapy, landmark detection, imaging genomics, and brain connectomics Features self-contained chapters with a thorough literature review Assesses the development of future machine learning techniques and the further application of existing techniques
Author: Le Lu Publisher: Springer ISBN: 331942999X Category : Computers Languages : en Pages : 327
Book Description
This book presents a detailed review of the state of the art in deep learning approaches for semantic object detection and segmentation in medical image computing, and large-scale radiology database mining. A particular focus is placed on the application of convolutional neural networks, with the theory supported by practical examples. Features: highlights how the use of deep neural networks can address new questions and protocols, as well as improve upon existing challenges in medical image computing; discusses the insightful research experience of Dr. Ronald M. Summers; presents a comprehensive review of the latest research and literature; describes a range of different methods that make use of deep learning for object or landmark detection tasks in 2D and 3D medical imaging; examines a varied selection of techniques for semantic segmentation using deep learning principles in medical imaging; introduces a novel approach to interleaved text and image deep mining on a large-scale radiology image database.
Author: Raj, Alex Noel Joseph Publisher: IGI Global ISBN: 1799866920 Category : Computers Languages : en Pages : 381
Book Description
Recent advancements in imaging techniques and image analysis has broadened the horizons for their applications in various domains. Image analysis has become an influential technique in medical image analysis, optical character recognition, geology, remote sensing, and more. However, analysis of images under constrained and unconstrained environments require efficient representation of the data and complex models for accurate interpretation and classification of data. Deep learning methods, with their hierarchical/multilayered architecture, allow the systems to learn complex mathematical models to provide improved performance in the required task. The Handbook of Research on Deep Learning-Based Image Analysis Under Constrained and Unconstrained Environments provides a critical examination of the latest advancements, developments, methods, systems, futuristic approaches, and algorithms for image analysis and addresses its challenges. Highlighting concepts, methods, and tools including convolutional neural networks, edge enhancement, image segmentation, machine learning, and image processing, the book is an essential and comprehensive reference work for engineers, academicians, researchers, and students.
Author: S. Kevin Zhou Publisher: Academic Press ISBN: 0128104090 Category : Computers Languages : en Pages : 460
Book Description
Deep learning is providing exciting solutions for medical image analysis problems and is seen as a key method for future applications. This book gives a clear understanding of the principles and methods of neural network and deep learning concepts, showing how the algorithms that integrate deep learning as a core component have been applied to medical image detection, segmentation and registration, and computer-aided analysis, using a wide variety of application areas. Deep Learning for Medical Image Analysis is a great learning resource for academic and industry researchers in medical imaging analysis, and for graduate students taking courses on machine learning and deep learning for computer vision and medical image computing and analysis. Covers common research problems in medical image analysis and their challenges Describes deep learning methods and the theories behind approaches for medical image analysis Teaches how algorithms are applied to a broad range of application areas, including Chest X-ray, breast CAD, lung and chest, microscopy and pathology, etc. Includes a Foreword written by Nicholas Ayache
Author: Nassir Navab Publisher: Springer ISBN: 3319245740 Category : Computers Languages : en Pages : 801
Book Description
The three-volume set LNCS 9349, 9350, and 9351 constitutes the refereed proceedings of the 18th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2015, held in Munich, Germany, in October 2015. Based on rigorous peer reviews, the program committee carefully selected 263 revised papers from 810 submissions for presentation in three volumes. The papers have been organized in the following topical sections: quantitative image analysis I: segmentation and measurement; computer-aided diagnosis: machine learning; computer-aided diagnosis: automation; quantitative image analysis II: classification, detection, features, and morphology; advanced MRI: diffusion, fMRI, DCE; quantitative image analysis III: motion, deformation, development and degeneration; quantitative image analysis IV: microscopy, fluorescence and histological imagery; registration: method and advanced applications; reconstruction, image formation, advanced acquisition - computational imaging; modelling and simulation for diagnosis and interventional planning; computer-assisted and image-guided interventions.
Author: S. Kevin Zhou
Author: S. Kevin Zhou
Author: Bharath Ramsundar
Author: Tim Scherr
Author: Vahid Ebrahimi
Author: Mei Chen
Author: Guorong Wu
Author: Le Lu
Author: Raj, Alex Noel Joseph
Author: S. Kevin Zhou
Author: Nassir Navab