Conservation and Metapopulation Management of the Federally Endangered Tidewater Gobies (Genus Eucyclogobius) PDF Download
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Author: Brenton Tyler Spies Publisher: ISBN: Category : Languages : en Pages : 147
Book Description
This project is directed towards implementing aspects of the tidewater goby recovery plan in coordination with, and funded by, the US Fish & Wildlife Service (USFWS) through a Section 6 Cooperative Agreement awarded to the University of California, Los Angeles on May 15, 2015. The primary focus of this dissertation was to developed a quantitative framework to complete a metapopulation viability analysis (MVA) for the endangered tidewater gobies in the genus Eucyclogobius. Modeling tidewater goby metapopulation dynamics is an essential component in constructing long-term management plans rangewide throughout the California Coast. This dissertation examines more closely how these dynamics affect viability, connectivity, and long-term persistence of tidewater goby metapopulations throughout the California coast. In the first chapter of this dissertation, I conducted annual population surveys (2014, 2015, and 2017-2018) in 117 estuaries and lagoons to assess the current health and status of the tidewater gobies in five of the six Recovery Units, spanning from Bodega Bay to San Diego, CA. This massive effort has provided continuous coastal surveys over four years, and over 300 observations, which helped create the framework for a robust and comprehensive presence/absence dataset to help inform metapopulation management and recovery actions. In the second chapter of this dissertation collated all existing rangewide occupancy data, metapopulation descriptors, wetland site characteristics, and repository specimen collections into an open access database. This database will provide critical information relative to the federally endangered tidewater gobies and help inform the metapopulation viability analysis model developed in this study, as well as support continued research on the conservation and management of these incredible fish species and the coastal wetland ecosystems they inhabit. In the third chapter of this dissertation I review the general biology, conservation status, habitat impacts, and metapopulation dynamics of the northern tidewater goby (Eucyclogobius newberryi) and southern tidewater goby (Eucyclogobius kristinae). In addition, I demonstrate the effectiveness of a Bayesian approach to provide a flexible method to generate metapopulation viability analyses and provide a detailed summary of the MVA model framework, including limitations, required corrections, and future amendments that need to be addressed in order to meet the recovery criterion envisioned in the recovery plan.
Author: Brenton Tyler Spies Publisher: ISBN: Category : Languages : en Pages : 147
Book Description
This project is directed towards implementing aspects of the tidewater goby recovery plan in coordination with, and funded by, the US Fish & Wildlife Service (USFWS) through a Section 6 Cooperative Agreement awarded to the University of California, Los Angeles on May 15, 2015. The primary focus of this dissertation was to developed a quantitative framework to complete a metapopulation viability analysis (MVA) for the endangered tidewater gobies in the genus Eucyclogobius. Modeling tidewater goby metapopulation dynamics is an essential component in constructing long-term management plans rangewide throughout the California Coast. This dissertation examines more closely how these dynamics affect viability, connectivity, and long-term persistence of tidewater goby metapopulations throughout the California coast. In the first chapter of this dissertation, I conducted annual population surveys (2014, 2015, and 2017-2018) in 117 estuaries and lagoons to assess the current health and status of the tidewater gobies in five of the six Recovery Units, spanning from Bodega Bay to San Diego, CA. This massive effort has provided continuous coastal surveys over four years, and over 300 observations, which helped create the framework for a robust and comprehensive presence/absence dataset to help inform metapopulation management and recovery actions. In the second chapter of this dissertation collated all existing rangewide occupancy data, metapopulation descriptors, wetland site characteristics, and repository specimen collections into an open access database. This database will provide critical information relative to the federally endangered tidewater gobies and help inform the metapopulation viability analysis model developed in this study, as well as support continued research on the conservation and management of these incredible fish species and the coastal wetland ecosystems they inhabit. In the third chapter of this dissertation I review the general biology, conservation status, habitat impacts, and metapopulation dynamics of the northern tidewater goby (Eucyclogobius newberryi) and southern tidewater goby (Eucyclogobius kristinae). In addition, I demonstrate the effectiveness of a Bayesian approach to provide a flexible method to generate metapopulation viability analyses and provide a detailed summary of the MVA model framework, including limitations, required corrections, and future amendments that need to be addressed in order to meet the recovery criterion envisioned in the recovery plan.
Author: Michael Sutter Publisher: ISBN: Category : Tidewater goby Languages : en Pages : 93
Book Description
Rangewide monitoring of fish species is critical for determining status and trends in abundance and distribution; however, implementations of large-scale distribution surveys have generally been constrained by time and cost. This study uses environmental DNA (eDNA) to monitor the presence or absence of two endangered tidewater goby species, the northern tidewater goby (Eucyclogobius newberryi) and the southern tidewater goby (Eucyclogobius kristinae), across their combined geographic range that encompasses the entire California coast (1,350 km). A multi-scale occupancy model designed specifically for eDNA methods was used to account for imperfect detection and to estimate true site occupancy. A total of 209 sites were surveyed in coastal California from Del Norte to San Diego counties between May and September 2016. Among these sites, 12 were dry during the survey and assigned a status of non-detection. Among the 197 sites with water present, a total of 430 water samples were collected, filtered, and tested for the presence/absence of northern and southern tidewater goby, using species-specific quantitative PCR (qPCR) assays. The number of water samples collected per site ranged from one to six. Northern tidewater goby were detected at 81 out of 175 sites and southern tidewater goby were detected at 4 out of 22 sites, resulting in a combined naïve occupancy of 0.43. In contrast, the multi-scale occupancy model estimated site occupancy at 0.55 (95% CRI 0.46-0.64), indicating that tidewater goby were present but not detected at 23 additional sites. Even though eDNA typically has higher detection probabilities than traditional field approaches, these findings indicate that imperfect detection needs to be accounted for in eDNA surveys. Tidewater goby were detected at seven sites where they have previously not been detected or were thought to be extirpated, including one site in San Francisco Bay. As a covariate, salinity was found to have a strong negative effect on qPCR detection probability and tidewater goby DNA availability in a water sample. This finding implies that when using eDNA methods for species detection, more water samples and qPCR replicates might be needed at high salinity sites to achieve the desired level of detection. This study illustrates the power of eDNA for generating point-in-time snapshots of a species' entire geographic distribution. The distributional information generated herein is critical for management as it will serve as a baseline for determining site occupancy and if tidewater goby are expanding or contracting in the number of sites occupied.
Author: Gene S. Helfman Publisher: Island Press ISBN: 9781559635967 Category : Science Languages : en Pages : 0
Book Description
Fish Conservation offers, for the first time in a single volume, a readable reference with a global approach to marine and freshwater fish diversity and fishery resource issues. Gene Helfman brings together available knowledge on the decline and restoration of freshwater and marine fishes, providing ecologically sound answers to biodiversity declines as well as to fishery management problems at the subsistence, recreational, and commercial levels. Written in an engaging and accessible style, the book: considers the value of preserving aquatic biodiversity offers an overview of imperiled fishes on a taxonomic and geographic basis presents a synthesis of common characteristics of imperiled fishes and their habitats details anthropogenic causes of decline examines human exploitation issues addresses ethical questions surrounding exploitation of fishes The final chapter integrates topics and evaluates prospects for arresting declines, emphasizing the application of evolutionary and ecological principles in light of projected trends. Throughout, Helfman provides examples, explores case studies, and synthesizes available information from a broad taxonomic, habitat, and geographic range. Fish Conservation summarizes the current state of knowledge about the degradation and restoration of diversity among fishes and the productivity of fishery resources, pointing out areas where progress has been made and where more needs to be done. Solutions focus on the application of ecological knowledge to solving practical problems, recognizing that effective biodiversity conservation depends on meeting human needs through management that focuses on long term sustainability and an ecosystem perspective.
Author: Brenton Tyler Spies
Author: Brenton Tyler Spies
Author: Michael Hellmair
Author: Michele Barlow
Author: William Tyler McCraney
Author: Ramona O'Halloran Swenson
Author: 
Author: 
Author: Michael Sutter
Author: Dan C. Holland
Author: Gene S. Helfman